Gene : Gorai.008G130900 G. raimondii v2.1
Defline:  (1 of 4) PTHR11516:SF25 - PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA-3, CHLOROPLASTIC Genomic Order:  1309
Name:  ? Gorai.008G130900 Secondary Identifier:  ? PAC:26814690
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-5173 Gossypium raimondii pathologic  
Graimondii PWY-5464 Gossypium raimondii pathologic  
Graimondii PYRUVDEHYD-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.008G130900 0.5kb upstream 0.5kb upstream 2977 true Chr08: 37632624-37635600 Gossypium raimondii
Gorai.008G130900 0.5kb upstream 0.5kb upstream 500 false Chr08: 37632624-37633123 Gossypium raimondii
Gorai.008G130900 0.5kb downstream 0.5kb downstream 2977 true Chr08: 37633124-37636100 Gossypium raimondii
Gorai.008G130900 0.5kb downstream 0.5kb downstream 500 false Chr08: 37635601-37636100 Gossypium raimondii
Gorai.008G130900 1.0kb upstream 1.0kb upstream 3477 true Chr08: 37632124-37635600 Gossypium raimondii
Gorai.008G130900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 37632124-37633123 Gossypium raimondii
Gorai.008G130900 1.0kb downstream 1.0kb downstream 3477 true Chr08: 37633124-37636600 Gossypium raimondii
Gorai.008G130900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 37635601-37636600 Gossypium raimondii
Gorai.008G130900 2.0kb upstream 2.0kb upstream 4477 true Chr08: 37631124-37635600 Gossypium raimondii
Gorai.008G130900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 37631124-37633123 Gossypium raimondii
Gorai.008G130900 2.0kb downstream 2.0kb downstream 4477 true Chr08: 37633124-37637600 Gossypium raimondii
Gorai.008G130900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 37635601-37637600 Gossypium raimondii
Gorai.008G130900 5.0kb upstream 5.0kb upstream 7477 true Chr08: 37628124-37635600 Gossypium raimondii
Gorai.008G130900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 37628124-37633123 Gossypium raimondii
Gorai.008G130900 5.0kb downstream 5.0kb downstream 7477 true Chr08: 37633124-37640600 Gossypium raimondii
Gorai.008G130900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 37635601-37640600 Gossypium raimondii
Gorai.008G130900 10.0kb upstream 10.0kb upstream 12477 true Chr08: 37623124-37635600 Gossypium raimondii
Gorai.008G130900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 37623124-37633123 Gossypium raimondii
Gorai.008G130900 10.0kb downstream 10.0kb downstream 12477 true Chr08: 37633124-37645600 Gossypium raimondii
Gorai.008G130900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 37635601-37645600 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835447 5264 Brassicales-Malvales View MSA
124343284 5266 SBM View MSA
124241416 5268 Malvidae View MSA
124066481 5270 Rosid View MSA
123745685 5271 Pentapetalae View MSA
122791580 5272 Eudicot View MSA
122044804 5273 Angiosperm View MSA
121347425 5274 Embryophyte View MSA
123423942 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain