Gene : Gorai.008G054800 G. raimondii v2.1
Defline:  (1 of 1) PTHR12162 - NIBRIN-RELATED Genomic Order:  548
Name:  ? Gorai.008G054800 Secondary Identifier:  ? PAC:26813530
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.008G054800 0.5kb upstream 0.5kb upstream 13454 true Chr08: 8025997-8039450 Gossypium raimondii
Gorai.008G054800 0.5kb upstream 0.5kb upstream 500 false Chr08: 8025997-8026496 Gossypium raimondii
Gorai.008G054800 0.5kb downstream 0.5kb downstream 13454 true Chr08: 8026497-8039950 Gossypium raimondii
Gorai.008G054800 0.5kb downstream 0.5kb downstream 500 false Chr08: 8039451-8039950 Gossypium raimondii
Gorai.008G054800 1.0kb upstream 1.0kb upstream 13954 true Chr08: 8025497-8039450 Gossypium raimondii
Gorai.008G054800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 8025497-8026496 Gossypium raimondii
Gorai.008G054800 1.0kb downstream 1.0kb downstream 13954 true Chr08: 8026497-8040450 Gossypium raimondii
Gorai.008G054800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 8039451-8040450 Gossypium raimondii
Gorai.008G054800 2.0kb upstream 2.0kb upstream 14954 true Chr08: 8024497-8039450 Gossypium raimondii
Gorai.008G054800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 8024497-8026496 Gossypium raimondii
Gorai.008G054800 2.0kb downstream 2.0kb downstream 14954 true Chr08: 8026497-8041450 Gossypium raimondii
Gorai.008G054800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 8039451-8041450 Gossypium raimondii
Gorai.008G054800 5.0kb upstream 5.0kb upstream 17954 true Chr08: 8021497-8039450 Gossypium raimondii
Gorai.008G054800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 8021497-8026496 Gossypium raimondii
Gorai.008G054800 5.0kb downstream 5.0kb downstream 17954 true Chr08: 8026497-8044450 Gossypium raimondii
Gorai.008G054800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 8039451-8044450 Gossypium raimondii
Gorai.008G054800 10.0kb upstream 10.0kb upstream 22954 true Chr08: 8016497-8039450 Gossypium raimondii
Gorai.008G054800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 8016497-8026496 Gossypium raimondii
Gorai.008G054800 10.0kb downstream 10.0kb downstream 22954 true Chr08: 8026497-8049450 Gossypium raimondii
Gorai.008G054800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 8039451-8049450 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833770 5264 Brassicales-Malvales View MSA
124321896 5266 SBM View MSA
124243815 5268 Malvidae View MSA
124064299 5270 Rosid View MSA
123737066 5271 Pentapetalae View MSA
122786000 5272 Eudicot View MSA
122047101 5273 Angiosperm View MSA
121349305 5274 Embryophyte View MSA
123381266 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain