Gene : Gorai.008G108900 G. raimondii v2.1
Defline:  (1 of 3) PTHR31403:SF8 - PHOSPHOLIPASE A(1) DAD1, CHLOROPLASTIC Genomic Order:  1089
Name:  ? Gorai.008G108900 Secondary Identifier:  ? PAC:26813485
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii LIPASYN-PWY Gossypium raimondii pathologic  
Graimondii PWY-6803 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.008G108900 0.5kb upstream 0.5kb upstream 1790 true Chr08: 33918889-33920678 Gossypium raimondii
Gorai.008G108900 0.5kb upstream 0.5kb upstream 500 false Chr08: 33920179-33920678 Gossypium raimondii
Gorai.008G108900 0.5kb downstream 0.5kb downstream 1790 true Chr08: 33918389-33920178 Gossypium raimondii
Gorai.008G108900 0.5kb downstream 0.5kb downstream 500 false Chr08: 33918389-33918888 Gossypium raimondii
Gorai.008G108900 1.0kb upstream 1.0kb upstream 2290 true Chr08: 33918889-33921178 Gossypium raimondii
Gorai.008G108900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 33920179-33921178 Gossypium raimondii
Gorai.008G108900 1.0kb downstream 1.0kb downstream 2290 true Chr08: 33917889-33920178 Gossypium raimondii
Gorai.008G108900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 33917889-33918888 Gossypium raimondii
Gorai.008G108900 2.0kb upstream 2.0kb upstream 3290 true Chr08: 33918889-33922178 Gossypium raimondii
Gorai.008G108900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 33920179-33922178 Gossypium raimondii
Gorai.008G108900 2.0kb downstream 2.0kb downstream 3290 true Chr08: 33916889-33920178 Gossypium raimondii
Gorai.008G108900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 33916889-33918888 Gossypium raimondii
Gorai.008G108900 5.0kb upstream 5.0kb upstream 6290 true Chr08: 33918889-33925178 Gossypium raimondii
Gorai.008G108900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 33920179-33925178 Gossypium raimondii
Gorai.008G108900 5.0kb downstream 5.0kb downstream 6290 true Chr08: 33913889-33920178 Gossypium raimondii
Gorai.008G108900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 33913889-33918888 Gossypium raimondii
Gorai.008G108900 10.0kb upstream 10.0kb upstream 11290 true Chr08: 33918889-33930178 Gossypium raimondii
Gorai.008G108900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 33920179-33930178 Gossypium raimondii
Gorai.008G108900 10.0kb downstream 10.0kb downstream 11290 true Chr08: 33908889-33920178 Gossypium raimondii
Gorai.008G108900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 33908889-33918888 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123809588 5264 Brassicales-Malvales Singleton cluster - no MSA
124350755 5266 SBM View MSA
124248726 5268 Malvidae View MSA
124071013 5270 Rosid View MSA
123746502 5271 Pentapetalae View MSA
122793823 5272 Eudicot View MSA
122047917 5273 Angiosperm View MSA
121310814 5274 Embryophyte View MSA
123428676 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain