Gene : Gorai.008G275300 G. raimondii v2.1
Defline:  (1 of 1) PTHR11451//PTHR11451:SF6 - TRNA SYNTHETASE-RELATED Genomic Order:  2753
Name:  ? Gorai.008G275300 Secondary Identifier:  ? PAC:26814445
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii TRNA-CHARGING-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.008G275300 0.5kb upstream 0.5kb upstream 6321 true Chr08: 55333398-55339718 Gossypium raimondii
Gorai.008G275300 0.5kb upstream 0.5kb upstream 500 false Chr08: 55339219-55339718 Gossypium raimondii
Gorai.008G275300 0.5kb downstream 0.5kb downstream 6321 true Chr08: 55332898-55339218 Gossypium raimondii
Gorai.008G275300 0.5kb downstream 0.5kb downstream 500 false Chr08: 55332898-55333397 Gossypium raimondii
Gorai.008G275300 1.0kb upstream 1.0kb upstream 6821 true Chr08: 55333398-55340218 Gossypium raimondii
Gorai.008G275300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 55339219-55340218 Gossypium raimondii
Gorai.008G275300 1.0kb downstream 1.0kb downstream 6821 true Chr08: 55332398-55339218 Gossypium raimondii
Gorai.008G275300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 55332398-55333397 Gossypium raimondii
Gorai.008G275300 2.0kb upstream 2.0kb upstream 7821 true Chr08: 55333398-55341218 Gossypium raimondii
Gorai.008G275300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 55339219-55341218 Gossypium raimondii
Gorai.008G275300 2.0kb downstream 2.0kb downstream 7821 true Chr08: 55331398-55339218 Gossypium raimondii
Gorai.008G275300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 55331398-55333397 Gossypium raimondii
Gorai.008G275300 5.0kb upstream 5.0kb upstream 10821 true Chr08: 55333398-55344218 Gossypium raimondii
Gorai.008G275300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 55339219-55344218 Gossypium raimondii
Gorai.008G275300 5.0kb downstream 5.0kb downstream 10821 true Chr08: 55328398-55339218 Gossypium raimondii
Gorai.008G275300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 55328398-55333397 Gossypium raimondii
Gorai.008G275300 10.0kb upstream 10.0kb upstream 15821 true Chr08: 55333398-55349218 Gossypium raimondii
Gorai.008G275300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 55339219-55349218 Gossypium raimondii
Gorai.008G275300 10.0kb downstream 10.0kb downstream 15821 true Chr08: 55323398-55339218 Gossypium raimondii
Gorai.008G275300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 55323398-55333397 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834383 5264 Brassicales-Malvales View MSA
124344312 5266 SBM View MSA
124238482 5268 Malvidae View MSA
124067863 5270 Rosid View MSA
123737640 5271 Pentapetalae View MSA
122793581 5272 Eudicot View MSA
122044069 5273 Angiosperm View MSA
121345199 5274 Embryophyte View MSA
123428629 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain