Gene : Gorai.008G053600 G. raimondii v2.1
Defline:  (1 of 2) 6.1.1.3 - Threonine--tRNA ligase / Threonyl-tRNA synthetase Genomic Order:  536
Name:  ? Gorai.008G053600 Secondary Identifier:  ? PAC:26814210
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii TRNA-CHARGING-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.008G053600 0.5kb upstream 0.5kb upstream 8169 true Chr08: 7720061-7728229 Gossypium raimondii
Gorai.008G053600 0.5kb upstream 0.5kb upstream 500 false Chr08: 7727730-7728229 Gossypium raimondii
Gorai.008G053600 0.5kb downstream 0.5kb downstream 8169 true Chr08: 7719561-7727729 Gossypium raimondii
Gorai.008G053600 0.5kb downstream 0.5kb downstream 500 false Chr08: 7719561-7720060 Gossypium raimondii
Gorai.008G053600 1.0kb upstream 1.0kb upstream 8669 true Chr08: 7720061-7728729 Gossypium raimondii
Gorai.008G053600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 7727730-7728729 Gossypium raimondii
Gorai.008G053600 1.0kb downstream 1.0kb downstream 8669 true Chr08: 7719061-7727729 Gossypium raimondii
Gorai.008G053600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 7719061-7720060 Gossypium raimondii
Gorai.008G053600 2.0kb upstream 2.0kb upstream 9669 true Chr08: 7720061-7729729 Gossypium raimondii
Gorai.008G053600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 7727730-7729729 Gossypium raimondii
Gorai.008G053600 2.0kb downstream 2.0kb downstream 9669 true Chr08: 7718061-7727729 Gossypium raimondii
Gorai.008G053600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 7718061-7720060 Gossypium raimondii
Gorai.008G053600 5.0kb upstream 5.0kb upstream 12669 true Chr08: 7720061-7732729 Gossypium raimondii
Gorai.008G053600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 7727730-7732729 Gossypium raimondii
Gorai.008G053600 5.0kb downstream 5.0kb downstream 12669 true Chr08: 7715061-7727729 Gossypium raimondii
Gorai.008G053600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 7715061-7720060 Gossypium raimondii
Gorai.008G053600 10.0kb upstream 10.0kb upstream 17669 true Chr08: 7720061-7737729 Gossypium raimondii
Gorai.008G053600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 7727730-7737729 Gossypium raimondii
Gorai.008G053600 10.0kb downstream 10.0kb downstream 17669 true Chr08: 7710061-7727729 Gossypium raimondii
Gorai.008G053600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 7710061-7720060 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828544 5264 Brassicales-Malvales View MSA
124337472 5266 SBM View MSA
124249574 5268 Malvidae View MSA
124061778 5270 Rosid View MSA
123740183 5271 Pentapetalae View MSA
122787371 5272 Eudicot View MSA
122045647 5273 Angiosperm View MSA
123429084 5275 Viridiplantae View MSA
121345438 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain