Gene : Gorai.008G249600 G. raimondii v2.1
Defline:  (1 of 3) 1.14.13.129 - Beta-carotene 3-hydroxylase / Beta-carotene 3,3'-monooxygenase Genomic Order:  2496
Name:  ? Gorai.008G249600 Secondary Identifier:  ? PAC:26818845
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii CAROTENOID-PWY Gossypium raimondii pathologic  
Graimondii PWY-5944 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.008G249600 0.5kb upstream 0.5kb upstream 2524 true Chr08: 53371473-53373996 Gossypium raimondii
Gorai.008G249600 0.5kb upstream 0.5kb upstream 500 false Chr08: 53373497-53373996 Gossypium raimondii
Gorai.008G249600 0.5kb downstream 0.5kb downstream 2524 true Chr08: 53370973-53373496 Gossypium raimondii
Gorai.008G249600 0.5kb downstream 0.5kb downstream 500 false Chr08: 53370973-53371472 Gossypium raimondii
Gorai.008G249600 1.0kb upstream 1.0kb upstream 3024 true Chr08: 53371473-53374496 Gossypium raimondii
Gorai.008G249600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 53373497-53374496 Gossypium raimondii
Gorai.008G249600 1.0kb downstream 1.0kb downstream 3024 true Chr08: 53370473-53373496 Gossypium raimondii
Gorai.008G249600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 53370473-53371472 Gossypium raimondii
Gorai.008G249600 2.0kb upstream 2.0kb upstream 4024 true Chr08: 53371473-53375496 Gossypium raimondii
Gorai.008G249600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 53373497-53375496 Gossypium raimondii
Gorai.008G249600 2.0kb downstream 2.0kb downstream 4024 true Chr08: 53369473-53373496 Gossypium raimondii
Gorai.008G249600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 53369473-53371472 Gossypium raimondii
Gorai.008G249600 5.0kb upstream 5.0kb upstream 7024 true Chr08: 53371473-53378496 Gossypium raimondii
Gorai.008G249600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 53373497-53378496 Gossypium raimondii
Gorai.008G249600 5.0kb downstream 5.0kb downstream 7024 true Chr08: 53366473-53373496 Gossypium raimondii
Gorai.008G249600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 53366473-53371472 Gossypium raimondii
Gorai.008G249600 10.0kb upstream 10.0kb upstream 12024 true Chr08: 53371473-53383496 Gossypium raimondii
Gorai.008G249600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 53373497-53383496 Gossypium raimondii
Gorai.008G249600 10.0kb downstream 10.0kb downstream 12024 true Chr08: 53361473-53373496 Gossypium raimondii
Gorai.008G249600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 53361473-53371472 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121665666 5273 Angiosperm View MSA
123825817 5264 Brassicales-Malvales View MSA
124320770 5266 SBM View MSA
124168766 5268 Malvidae View MSA
124051338 5270 Rosid View MSA
123620121 5271 Pentapetalae View MSA
122654537 5272 Eudicot View MSA
123429104 5275 Viridiplantae View MSA
121351007 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain