Gene : Gorai.008G117700 G. raimondii v2.1
Defline:  (1 of 4) 2.1.1.257 - tRNA (pseudouridine(54)-N(1))-methyltransferase / M(1)-Psi methyltransferase Genomic Order:  1177
Name:  ? Gorai.008G117700 Secondary Identifier:  ? PAC:26813632
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.008G117700 0.5kb upstream 0.5kb upstream 3189 true Chr08: 35315583-35318771 Gossypium raimondii
Gorai.008G117700 0.5kb upstream 0.5kb upstream 500 false Chr08: 35315583-35316082 Gossypium raimondii
Gorai.008G117700 0.5kb downstream 0.5kb downstream 3189 true Chr08: 35316083-35319271 Gossypium raimondii
Gorai.008G117700 0.5kb downstream 0.5kb downstream 500 false Chr08: 35318772-35319271 Gossypium raimondii
Gorai.008G117700 1.0kb upstream 1.0kb upstream 3689 true Chr08: 35315083-35318771 Gossypium raimondii
Gorai.008G117700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 35315083-35316082 Gossypium raimondii
Gorai.008G117700 1.0kb downstream 1.0kb downstream 3689 true Chr08: 35316083-35319771 Gossypium raimondii
Gorai.008G117700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 35318772-35319771 Gossypium raimondii
Gorai.008G117700 2.0kb upstream 2.0kb upstream 4689 true Chr08: 35314083-35318771 Gossypium raimondii
Gorai.008G117700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 35314083-35316082 Gossypium raimondii
Gorai.008G117700 2.0kb downstream 2.0kb downstream 4689 true Chr08: 35316083-35320771 Gossypium raimondii
Gorai.008G117700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 35318772-35320771 Gossypium raimondii
Gorai.008G117700 5.0kb upstream 5.0kb upstream 7689 true Chr08: 35311083-35318771 Gossypium raimondii
Gorai.008G117700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 35311083-35316082 Gossypium raimondii
Gorai.008G117700 5.0kb downstream 5.0kb downstream 7689 true Chr08: 35316083-35323771 Gossypium raimondii
Gorai.008G117700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 35318772-35323771 Gossypium raimondii
Gorai.008G117700 10.0kb upstream 10.0kb upstream 12689 true Chr08: 35306083-35318771 Gossypium raimondii
Gorai.008G117700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 35306083-35316082 Gossypium raimondii
Gorai.008G117700 10.0kb downstream 10.0kb downstream 12689 true Chr08: 35316083-35328771 Gossypium raimondii
Gorai.008G117700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 35318772-35328771 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834900 5264 Brassicales-Malvales View MSA
124341453 5266 SBM View MSA
124247817 5268 Malvidae View MSA
124066897 5270 Rosid View MSA
123749345 5271 Pentapetalae View MSA
122789424 5272 Eudicot View MSA
122046063 5273 Angiosperm View MSA
121345370 5274 Embryophyte View MSA
123425050 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain