Gene : Gorai.005G178900 G. raimondii v2.1
Defline:  (1 of 2) PTHR11206:SF79 - MATE EFFLUX FAMILY PROTEIN Genomic Order:  1789
Name:  ? Gorai.005G178900 Secondary Identifier:  ? PAC:26805357
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G178900 0.5kb upstream 0.5kb upstream 5362 true Chr05: 52404202-52409563 Gossypium raimondii
Gorai.005G178900 0.5kb upstream 0.5kb upstream 500 false Chr05: 52409064-52409563 Gossypium raimondii
Gorai.005G178900 0.5kb downstream 0.5kb downstream 5362 true Chr05: 52403702-52409063 Gossypium raimondii
Gorai.005G178900 0.5kb downstream 0.5kb downstream 500 false Chr05: 52403702-52404201 Gossypium raimondii
Gorai.005G178900 1.0kb upstream 1.0kb upstream 5862 true Chr05: 52404202-52410063 Gossypium raimondii
Gorai.005G178900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 52409064-52410063 Gossypium raimondii
Gorai.005G178900 1.0kb downstream 1.0kb downstream 5862 true Chr05: 52403202-52409063 Gossypium raimondii
Gorai.005G178900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 52403202-52404201 Gossypium raimondii
Gorai.005G178900 2.0kb upstream 2.0kb upstream 6862 true Chr05: 52404202-52411063 Gossypium raimondii
Gorai.005G178900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 52409064-52411063 Gossypium raimondii
Gorai.005G178900 2.0kb downstream 2.0kb downstream 6862 true Chr05: 52402202-52409063 Gossypium raimondii
Gorai.005G178900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 52402202-52404201 Gossypium raimondii
Gorai.005G178900 5.0kb upstream 5.0kb upstream 9862 true Chr05: 52404202-52414063 Gossypium raimondii
Gorai.005G178900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 52409064-52414063 Gossypium raimondii
Gorai.005G178900 5.0kb downstream 5.0kb downstream 9862 true Chr05: 52399202-52409063 Gossypium raimondii
Gorai.005G178900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 52399202-52404201 Gossypium raimondii
Gorai.005G178900 10.0kb upstream 10.0kb upstream 14862 true Chr05: 52404202-52419063 Gossypium raimondii
Gorai.005G178900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 52409064-52419063 Gossypium raimondii
Gorai.005G178900 10.0kb downstream 10.0kb downstream 14862 true Chr05: 52394202-52409063 Gossypium raimondii
Gorai.005G178900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 52394202-52404201 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836545 5264 Brassicales-Malvales View MSA
124345472 5266 SBM View MSA
124244328 5268 Malvidae View MSA
124068110 5270 Rosid View MSA
123753109 5271 Pentapetalae View MSA
122797339 5272 Eudicot View MSA
122050809 5273 Angiosperm View MSA
121344541 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain