Gene : Gorai.005G176600 G. raimondii v2.1
Defline:  (1 of 1) PTHR11452:SF14 - ALPHA-GALACTOSIDASE A Genomic Order:  1766
Name:  ? Gorai.005G176600 Secondary Identifier:  ? PAC:26803121
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY0-1301 Gossypium raimondii pathologic  
Graimondii PWY-6527 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G176600 0.5kb upstream 0.5kb upstream 4855 true Chr05: 51786083-51790937 Gossypium raimondii
Gorai.005G176600 0.5kb upstream 0.5kb upstream 500 false Chr05: 51786083-51786582 Gossypium raimondii
Gorai.005G176600 0.5kb downstream 0.5kb downstream 4855 true Chr05: 51786583-51791437 Gossypium raimondii
Gorai.005G176600 0.5kb downstream 0.5kb downstream 500 false Chr05: 51790938-51791437 Gossypium raimondii
Gorai.005G176600 1.0kb upstream 1.0kb upstream 5355 true Chr05: 51785583-51790937 Gossypium raimondii
Gorai.005G176600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 51785583-51786582 Gossypium raimondii
Gorai.005G176600 1.0kb downstream 1.0kb downstream 5355 true Chr05: 51786583-51791937 Gossypium raimondii
Gorai.005G176600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 51790938-51791937 Gossypium raimondii
Gorai.005G176600 2.0kb upstream 2.0kb upstream 6355 true Chr05: 51784583-51790937 Gossypium raimondii
Gorai.005G176600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 51784583-51786582 Gossypium raimondii
Gorai.005G176600 2.0kb downstream 2.0kb downstream 6355 true Chr05: 51786583-51792937 Gossypium raimondii
Gorai.005G176600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 51790938-51792937 Gossypium raimondii
Gorai.005G176600 5.0kb upstream 5.0kb upstream 9355 true Chr05: 51781583-51790937 Gossypium raimondii
Gorai.005G176600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 51781583-51786582 Gossypium raimondii
Gorai.005G176600 5.0kb downstream 5.0kb downstream 9355 true Chr05: 51786583-51795937 Gossypium raimondii
Gorai.005G176600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 51790938-51795937 Gossypium raimondii
Gorai.005G176600 10.0kb upstream 10.0kb upstream 14355 true Chr05: 51776583-51790937 Gossypium raimondii
Gorai.005G176600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 51776583-51786582 Gossypium raimondii
Gorai.005G176600 10.0kb downstream 10.0kb downstream 14355 true Chr05: 51786583-51800937 Gossypium raimondii
Gorai.005G176600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 51790938-51800937 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827886 5264 Brassicales-Malvales View MSA
124343227 5266 SBM View MSA
124238425 5268 Malvidae View MSA
124064341 5270 Rosid View MSA
123740921 5271 Pentapetalae View MSA
122794912 5272 Eudicot View MSA
122043993 5273 Angiosperm View MSA
121347299 5274 Embryophyte View MSA
123428348 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain