Gene : Gorai.008G139400 G. raimondii v2.1
Defline:  (1 of 3) PTHR33921:SF2 - CALVIN CYCLE PROTEIN CP12-1, CHLOROPLASTIC-RELATED Genomic Order:  1394
Name:  ? Gorai.008G139400 Secondary Identifier:  ? PAC:26817435
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.008G139400 0.5kb upstream 0.5kb upstream 1269 true Chr08: 39021254-39022522 Gossypium raimondii
Gorai.008G139400 0.5kb upstream 0.5kb upstream 500 false Chr08: 39021254-39021753 Gossypium raimondii
Gorai.008G139400 0.5kb downstream 0.5kb downstream 1269 true Chr08: 39021754-39023022 Gossypium raimondii
Gorai.008G139400 0.5kb downstream 0.5kb downstream 500 false Chr08: 39022523-39023022 Gossypium raimondii
Gorai.008G139400 1.0kb upstream 1.0kb upstream 1769 true Chr08: 39020754-39022522 Gossypium raimondii
Gorai.008G139400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 39020754-39021753 Gossypium raimondii
Gorai.008G139400 1.0kb downstream 1.0kb downstream 1769 true Chr08: 39021754-39023522 Gossypium raimondii
Gorai.008G139400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 39022523-39023522 Gossypium raimondii
Gorai.008G139400 2.0kb upstream 2.0kb upstream 2769 true Chr08: 39019754-39022522 Gossypium raimondii
Gorai.008G139400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 39019754-39021753 Gossypium raimondii
Gorai.008G139400 2.0kb downstream 2.0kb downstream 2769 true Chr08: 39021754-39024522 Gossypium raimondii
Gorai.008G139400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 39022523-39024522 Gossypium raimondii
Gorai.008G139400 5.0kb upstream 5.0kb upstream 5769 true Chr08: 39016754-39022522 Gossypium raimondii
Gorai.008G139400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 39016754-39021753 Gossypium raimondii
Gorai.008G139400 5.0kb downstream 5.0kb downstream 5769 true Chr08: 39021754-39027522 Gossypium raimondii
Gorai.008G139400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 39022523-39027522 Gossypium raimondii
Gorai.008G139400 10.0kb upstream 10.0kb upstream 10769 true Chr08: 39011754-39022522 Gossypium raimondii
Gorai.008G139400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 39011754-39021753 Gossypium raimondii
Gorai.008G139400 10.0kb downstream 10.0kb downstream 10769 true Chr08: 39021754-39032522 Gossypium raimondii
Gorai.008G139400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 39022523-39032522 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841379 5264 Brassicales-Malvales View MSA
124347812 5266 SBM View MSA
124254040 5268 Malvidae View MSA
124070241 5270 Rosid View MSA
123742696 5271 Pentapetalae View MSA
122795504 5272 Eudicot View MSA
122046618 5273 Angiosperm View MSA
121351753 5274 Embryophyte View MSA
123424034 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain