Gene : Gorai.008G093900 G. raimondii v2.1
Defline:  (1 of 3) PTHR36411:SF2 - PHOTOSYSTEM II REACTION CENTER PROTEIN T Genomic Order:  939
Name:  ? Gorai.008G093900 Secondary Identifier:  ? PAC:26814253
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.008G093900 0.5kb upstream 0.5kb upstream 602 true Chr08: 23624940-23625541 Gossypium raimondii
Gorai.008G093900 0.5kb upstream 0.5kb upstream 500 false Chr08: 23624940-23625439 Gossypium raimondii
Gorai.008G093900 0.5kb downstream 0.5kb downstream 602 true Chr08: 23625440-23626041 Gossypium raimondii
Gorai.008G093900 0.5kb downstream 0.5kb downstream 500 false Chr08: 23625542-23626041 Gossypium raimondii
Gorai.008G093900 1.0kb upstream 1.0kb upstream 1102 true Chr08: 23624440-23625541 Gossypium raimondii
Gorai.008G093900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 23624440-23625439 Gossypium raimondii
Gorai.008G093900 1.0kb downstream 1.0kb downstream 1102 true Chr08: 23625440-23626541 Gossypium raimondii
Gorai.008G093900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 23625542-23626541 Gossypium raimondii
Gorai.008G093900 2.0kb upstream 2.0kb upstream 2102 true Chr08: 23623440-23625541 Gossypium raimondii
Gorai.008G093900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 23623440-23625439 Gossypium raimondii
Gorai.008G093900 2.0kb downstream 2.0kb downstream 2102 true Chr08: 23625440-23627541 Gossypium raimondii
Gorai.008G093900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 23625542-23627541 Gossypium raimondii
Gorai.008G093900 5.0kb upstream 5.0kb upstream 5102 true Chr08: 23620440-23625541 Gossypium raimondii
Gorai.008G093900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 23620440-23625439 Gossypium raimondii
Gorai.008G093900 5.0kb downstream 5.0kb downstream 5102 true Chr08: 23625440-23630541 Gossypium raimondii
Gorai.008G093900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 23625542-23630541 Gossypium raimondii
Gorai.008G093900 10.0kb upstream 10.0kb upstream 10102 true Chr08: 23615440-23625541 Gossypium raimondii
Gorai.008G093900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 23615440-23625439 Gossypium raimondii
Gorai.008G093900 10.0kb downstream 10.0kb downstream 10102 true Chr08: 23625440-23635541 Gossypium raimondii
Gorai.008G093900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 23625542-23635541 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029234 5273 Angiosperm View MSA
123809679 5264 Brassicales-Malvales Singleton cluster - no MSA
124306420 5266 SBM Singleton cluster - no MSA
124156588 5268 Malvidae Singleton cluster - no MSA
123881233 5270 Rosid Singleton cluster - no MSA
123464281 5271 Pentapetalae Singleton cluster - no MSA
122499609 5272 Eudicot Singleton cluster - no MSA
121298595 5274 Embryophyte View MSA
123336557 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain