Gene : Gorai.008G033300 G. raimondii v2.1
Defline:  (1 of 2) PTHR11877//PTHR11877:SF25 - HYDROXYMETHYLGLUTARYL-COA SYNTHASE Genomic Order:  333
Name:  ? Gorai.008G033300 Secondary Identifier:  ? PAC:26815007
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.008G033300 0.5kb upstream 0.5kb upstream 2233 true Chr08: 4016602-4018834 Gossypium raimondii
Gorai.008G033300 0.5kb upstream 0.5kb upstream 500 false Chr08: 4016602-4017101 Gossypium raimondii
Gorai.008G033300 0.5kb downstream 0.5kb downstream 2233 true Chr08: 4017102-4019334 Gossypium raimondii
Gorai.008G033300 0.5kb downstream 0.5kb downstream 500 false Chr08: 4018835-4019334 Gossypium raimondii
Gorai.008G033300 1.0kb upstream 1.0kb upstream 2733 true Chr08: 4016102-4018834 Gossypium raimondii
Gorai.008G033300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4016102-4017101 Gossypium raimondii
Gorai.008G033300 1.0kb downstream 1.0kb downstream 2733 true Chr08: 4017102-4019834 Gossypium raimondii
Gorai.008G033300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4018835-4019834 Gossypium raimondii
Gorai.008G033300 2.0kb upstream 2.0kb upstream 3733 true Chr08: 4015102-4018834 Gossypium raimondii
Gorai.008G033300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4015102-4017101 Gossypium raimondii
Gorai.008G033300 2.0kb downstream 2.0kb downstream 3733 true Chr08: 4017102-4020834 Gossypium raimondii
Gorai.008G033300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4018835-4020834 Gossypium raimondii
Gorai.008G033300 5.0kb upstream 5.0kb upstream 6733 true Chr08: 4012102-4018834 Gossypium raimondii
Gorai.008G033300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4012102-4017101 Gossypium raimondii
Gorai.008G033300 5.0kb downstream 5.0kb downstream 6733 true Chr08: 4017102-4023834 Gossypium raimondii
Gorai.008G033300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4018835-4023834 Gossypium raimondii
Gorai.008G033300 10.0kb upstream 10.0kb upstream 11733 true Chr08: 4007102-4018834 Gossypium raimondii
Gorai.008G033300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4007102-4017101 Gossypium raimondii
Gorai.008G033300 10.0kb downstream 10.0kb downstream 11733 true Chr08: 4017102-4028834 Gossypium raimondii
Gorai.008G033300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4018835-4028834 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828029 5264 Brassicales-Malvales View MSA
124342299 5266 SBM View MSA
124240993 5268 Malvidae View MSA
124063959 5270 Rosid View MSA
123736714 5271 Pentapetalae View MSA
122788702 5272 Eudicot View MSA
122042999 5273 Angiosperm View MSA
121348952 5274 Embryophyte View MSA
123428386 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain