Gene : Gorai.008G055600 G. raimondii v2.1
Defline:  (1 of 2) 5.3.99.9 - Neoxanthin synthase / NSY Genomic Order:  556
Name:  ? Gorai.008G055600 Secondary Identifier:  ? PAC:26815030
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-6809 Gossypium raimondii pathologic  
Graimondii PWY-695 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.008G055600 0.5kb upstream 0.5kb upstream 4098 true Chr08: 8235861-8239958 Gossypium raimondii
Gorai.008G055600 0.5kb upstream 0.5kb upstream 500 false Chr08: 8239459-8239958 Gossypium raimondii
Gorai.008G055600 0.5kb downstream 0.5kb downstream 4098 true Chr08: 8235361-8239458 Gossypium raimondii
Gorai.008G055600 0.5kb downstream 0.5kb downstream 500 false Chr08: 8235361-8235860 Gossypium raimondii
Gorai.008G055600 1.0kb upstream 1.0kb upstream 4598 true Chr08: 8235861-8240458 Gossypium raimondii
Gorai.008G055600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 8239459-8240458 Gossypium raimondii
Gorai.008G055600 1.0kb downstream 1.0kb downstream 4598 true Chr08: 8234861-8239458 Gossypium raimondii
Gorai.008G055600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 8234861-8235860 Gossypium raimondii
Gorai.008G055600 2.0kb upstream 2.0kb upstream 5598 true Chr08: 8235861-8241458 Gossypium raimondii
Gorai.008G055600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 8239459-8241458 Gossypium raimondii
Gorai.008G055600 2.0kb downstream 2.0kb downstream 5598 true Chr08: 8233861-8239458 Gossypium raimondii
Gorai.008G055600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 8233861-8235860 Gossypium raimondii
Gorai.008G055600 5.0kb upstream 5.0kb upstream 8598 true Chr08: 8235861-8244458 Gossypium raimondii
Gorai.008G055600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 8239459-8244458 Gossypium raimondii
Gorai.008G055600 5.0kb downstream 5.0kb downstream 8598 true Chr08: 8230861-8239458 Gossypium raimondii
Gorai.008G055600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 8230861-8235860 Gossypium raimondii
Gorai.008G055600 10.0kb upstream 10.0kb upstream 13598 true Chr08: 8235861-8249458 Gossypium raimondii
Gorai.008G055600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 8239459-8249458 Gossypium raimondii
Gorai.008G055600 10.0kb downstream 10.0kb downstream 13598 true Chr08: 8225861-8239458 Gossypium raimondii
Gorai.008G055600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 8225861-8235860 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832925 5264 Brassicales-Malvales View MSA
124339377 5266 SBM View MSA
124248470 5268 Malvidae View MSA
124062178 5270 Rosid View MSA
123748588 5271 Pentapetalae View MSA
122790006 5272 Eudicot View MSA
122047205 5273 Angiosperm View MSA
121346000 5274 Embryophyte View MSA
123425892 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain