Gene : Gorai.005G181300 G. raimondii v2.1
Defline:  (1 of 1) PTHR24015:SF705 - PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Genomic Order:  1813
Name:  ? Gorai.005G181300 Secondary Identifier:  ? PAC:26803060
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-1081 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G181300 0.5kb upstream 0.5kb upstream 6485 true Chr05: 53098018-53104502 Gossypium raimondii
Gorai.005G181300 0.5kb upstream 0.5kb upstream 500 false Chr05: 53098018-53098517 Gossypium raimondii
Gorai.005G181300 0.5kb downstream 0.5kb downstream 6485 true Chr05: 53098518-53105002 Gossypium raimondii
Gorai.005G181300 0.5kb downstream 0.5kb downstream 500 false Chr05: 53104503-53105002 Gossypium raimondii
Gorai.005G181300 1.0kb upstream 1.0kb upstream 6985 true Chr05: 53097518-53104502 Gossypium raimondii
Gorai.005G181300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 53097518-53098517 Gossypium raimondii
Gorai.005G181300 1.0kb downstream 1.0kb downstream 6985 true Chr05: 53098518-53105502 Gossypium raimondii
Gorai.005G181300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 53104503-53105502 Gossypium raimondii
Gorai.005G181300 2.0kb upstream 2.0kb upstream 7985 true Chr05: 53096518-53104502 Gossypium raimondii
Gorai.005G181300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 53096518-53098517 Gossypium raimondii
Gorai.005G181300 2.0kb downstream 2.0kb downstream 7985 true Chr05: 53098518-53106502 Gossypium raimondii
Gorai.005G181300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 53104503-53106502 Gossypium raimondii
Gorai.005G181300 5.0kb upstream 5.0kb upstream 10985 true Chr05: 53093518-53104502 Gossypium raimondii
Gorai.005G181300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 53093518-53098517 Gossypium raimondii
Gorai.005G181300 5.0kb downstream 5.0kb downstream 10985 true Chr05: 53098518-53109502 Gossypium raimondii
Gorai.005G181300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 53104503-53109502 Gossypium raimondii
Gorai.005G181300 10.0kb upstream 10.0kb upstream 15985 true Chr05: 53088518-53104502 Gossypium raimondii
Gorai.005G181300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 53088518-53098517 Gossypium raimondii
Gorai.005G181300 10.0kb downstream 10.0kb downstream 15985 true Chr05: 53098518-53114502 Gossypium raimondii
Gorai.005G181300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 53104503-53114502 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838610 5264 Brassicales-Malvales View MSA
124347756 5266 SBM View MSA
124245641 5268 Malvidae View MSA
124069340 5270 Rosid View MSA
123627867 5271 Pentapetalae View MSA
122795496 5272 Eudicot View MSA
122048202 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121310882 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain