Gene : Gorai.008G232200 G. raimondii v2.1
Defline:  (1 of 2) PTHR11941:SF61 - PROTEIN ECH-5 Genomic Order:  2322
Name:  ? Gorai.008G232200 Secondary Identifier:  ? PAC:26816327
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii LEU-DEG2-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.008G232200 0.5kb upstream 0.5kb upstream 2902 true Chr08: 51860239-51863140 Gossypium raimondii
Gorai.008G232200 0.5kb upstream 0.5kb upstream 500 false Chr08: 51860239-51860738 Gossypium raimondii
Gorai.008G232200 0.5kb downstream 0.5kb downstream 2902 true Chr08: 51860739-51863640 Gossypium raimondii
Gorai.008G232200 0.5kb downstream 0.5kb downstream 500 false Chr08: 51863141-51863640 Gossypium raimondii
Gorai.008G232200 1.0kb upstream 1.0kb upstream 3402 true Chr08: 51859739-51863140 Gossypium raimondii
Gorai.008G232200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 51859739-51860738 Gossypium raimondii
Gorai.008G232200 1.0kb downstream 1.0kb downstream 3402 true Chr08: 51860739-51864140 Gossypium raimondii
Gorai.008G232200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 51863141-51864140 Gossypium raimondii
Gorai.008G232200 2.0kb upstream 2.0kb upstream 4402 true Chr08: 51858739-51863140 Gossypium raimondii
Gorai.008G232200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 51858739-51860738 Gossypium raimondii
Gorai.008G232200 2.0kb downstream 2.0kb downstream 4402 true Chr08: 51860739-51865140 Gossypium raimondii
Gorai.008G232200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 51863141-51865140 Gossypium raimondii
Gorai.008G232200 5.0kb upstream 5.0kb upstream 7402 true Chr08: 51855739-51863140 Gossypium raimondii
Gorai.008G232200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 51855739-51860738 Gossypium raimondii
Gorai.008G232200 5.0kb downstream 5.0kb downstream 7402 true Chr08: 51860739-51868140 Gossypium raimondii
Gorai.008G232200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 51863141-51868140 Gossypium raimondii
Gorai.008G232200 10.0kb upstream 10.0kb upstream 12402 true Chr08: 51850739-51863140 Gossypium raimondii
Gorai.008G232200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 51850739-51860738 Gossypium raimondii
Gorai.008G232200 10.0kb downstream 10.0kb downstream 12402 true Chr08: 51860739-51873140 Gossypium raimondii
Gorai.008G232200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 51863141-51873140 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834998 5264 Brassicales-Malvales View MSA
124321989 5266 SBM View MSA
124240745 5268 Malvidae View MSA
124069005 5270 Rosid View MSA
123739015 5271 Pentapetalae View MSA
122790936 5272 Eudicot View MSA
122045797 5273 Angiosperm View MSA
121351751 5274 Embryophyte View MSA
123427880 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain