Gene : Gorai.005G183500 G. raimondii v2.1
Defline:  (1 of 5) 2.5.1.16 - Spermidine synthase / Putrescine aminopropyltransferase Genomic Order:  1835
Name:  ? Gorai.005G183500 Secondary Identifier:  ? PAC:26802994
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii BSUBPOLYAMSYN-PWY Gossypium raimondii pathologic  
Graimondii POLYAMINSYN3-PWY Gossypium raimondii pathologic  
Graimondii PWY-7528 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G183500 0.5kb upstream 0.5kb upstream 4878 true Chr05: 53592591-53597468 Gossypium raimondii
Gorai.005G183500 0.5kb upstream 0.5kb upstream 500 false Chr05: 53592591-53593090 Gossypium raimondii
Gorai.005G183500 0.5kb downstream 0.5kb downstream 4878 true Chr05: 53593091-53597968 Gossypium raimondii
Gorai.005G183500 0.5kb downstream 0.5kb downstream 500 false Chr05: 53597469-53597968 Gossypium raimondii
Gorai.005G183500 1.0kb upstream 1.0kb upstream 5378 true Chr05: 53592091-53597468 Gossypium raimondii
Gorai.005G183500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 53592091-53593090 Gossypium raimondii
Gorai.005G183500 1.0kb downstream 1.0kb downstream 5378 true Chr05: 53593091-53598468 Gossypium raimondii
Gorai.005G183500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 53597469-53598468 Gossypium raimondii
Gorai.005G183500 2.0kb upstream 2.0kb upstream 6378 true Chr05: 53591091-53597468 Gossypium raimondii
Gorai.005G183500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 53591091-53593090 Gossypium raimondii
Gorai.005G183500 2.0kb downstream 2.0kb downstream 6378 true Chr05: 53593091-53599468 Gossypium raimondii
Gorai.005G183500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 53597469-53599468 Gossypium raimondii
Gorai.005G183500 5.0kb upstream 5.0kb upstream 9378 true Chr05: 53588091-53597468 Gossypium raimondii
Gorai.005G183500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 53588091-53593090 Gossypium raimondii
Gorai.005G183500 5.0kb downstream 5.0kb downstream 9378 true Chr05: 53593091-53602468 Gossypium raimondii
Gorai.005G183500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 53597469-53602468 Gossypium raimondii
Gorai.005G183500 10.0kb upstream 10.0kb upstream 14378 true Chr05: 53583091-53597468 Gossypium raimondii
Gorai.005G183500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 53583091-53593090 Gossypium raimondii
Gorai.005G183500 10.0kb downstream 10.0kb downstream 14378 true Chr05: 53593091-53607468 Gossypium raimondii
Gorai.005G183500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 53597469-53607468 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837275 5264 Brassicales-Malvales View MSA
124342552 5266 SBM View MSA
124246037 5268 Malvidae View MSA
124061949 5270 Rosid View MSA
123741827 5271 Pentapetalae View MSA
122790008 5272 Eudicot View MSA
122043696 5273 Angiosperm View MSA
121346443 5274 Embryophyte View MSA
123424303 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain