Gene : Gorai.009G251000 G. raimondii v2.1
Defline:  (1 of 4) 1.2.4.4 - 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) / Dehydrogenase, branched chain alpha-keto acid Genomic Order:  2510
Name:  ? Gorai.009G251000 Secondary Identifier:  ? PAC:26769548
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-5046 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.009G251000 0.5kb upstream 0.5kb upstream 5139 true Chr09: 20439798-20444936 Gossypium raimondii
Gorai.009G251000 0.5kb upstream 0.5kb upstream 500 false Chr09: 20439798-20440297 Gossypium raimondii
Gorai.009G251000 0.5kb downstream 0.5kb downstream 5139 true Chr09: 20440298-20445436 Gossypium raimondii
Gorai.009G251000 0.5kb downstream 0.5kb downstream 500 false Chr09: 20444937-20445436 Gossypium raimondii
Gorai.009G251000 1.0kb upstream 1.0kb upstream 5639 true Chr09: 20439298-20444936 Gossypium raimondii
Gorai.009G251000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 20439298-20440297 Gossypium raimondii
Gorai.009G251000 1.0kb downstream 1.0kb downstream 5639 true Chr09: 20440298-20445936 Gossypium raimondii
Gorai.009G251000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 20444937-20445936 Gossypium raimondii
Gorai.009G251000 2.0kb upstream 2.0kb upstream 6639 true Chr09: 20438298-20444936 Gossypium raimondii
Gorai.009G251000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 20438298-20440297 Gossypium raimondii
Gorai.009G251000 2.0kb downstream 2.0kb downstream 6639 true Chr09: 20440298-20446936 Gossypium raimondii
Gorai.009G251000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 20444937-20446936 Gossypium raimondii
Gorai.009G251000 5.0kb upstream 5.0kb upstream 9639 true Chr09: 20435298-20444936 Gossypium raimondii
Gorai.009G251000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 20435298-20440297 Gossypium raimondii
Gorai.009G251000 5.0kb downstream 5.0kb downstream 9639 true Chr09: 20440298-20449936 Gossypium raimondii
Gorai.009G251000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 20444937-20449936 Gossypium raimondii
Gorai.009G251000 10.0kb upstream 10.0kb upstream 14639 true Chr09: 20430298-20444936 Gossypium raimondii
Gorai.009G251000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 20430298-20440297 Gossypium raimondii
Gorai.009G251000 10.0kb downstream 10.0kb downstream 14639 true Chr09: 20440298-20454936 Gossypium raimondii
Gorai.009G251000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 20444937-20454936 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832958 5264 Brassicales-Malvales View MSA
124348231 5266 SBM View MSA
124244585 5268 Malvidae View MSA
124064753 5270 Rosid View MSA
123750640 5271 Pentapetalae View MSA
122791863 5272 Eudicot View MSA
122044172 5273 Angiosperm View MSA
121346270 5274 Embryophyte View MSA
123428672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain