Gene : Gorai.009G237200 G. raimondii v2.1
Defline:  (1 of 1) PTHR23160:SF3 - SYNAPTONEMAL COMPLEX PROTEIN 1-RELATED Genomic Order:  2372
Name:  ? Gorai.009G237200 Secondary Identifier:  ? PAC:26768709
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.009G237200 0.5kb upstream 0.5kb upstream 6727 true Chr09: 18767448-18774174 Gossypium raimondii
Gorai.009G237200 0.5kb upstream 0.5kb upstream 500 false Chr09: 18767448-18767947 Gossypium raimondii
Gorai.009G237200 0.5kb downstream 0.5kb downstream 6727 true Chr09: 18767948-18774674 Gossypium raimondii
Gorai.009G237200 0.5kb downstream 0.5kb downstream 500 false Chr09: 18774175-18774674 Gossypium raimondii
Gorai.009G237200 1.0kb upstream 1.0kb upstream 7227 true Chr09: 18766948-18774174 Gossypium raimondii
Gorai.009G237200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 18766948-18767947 Gossypium raimondii
Gorai.009G237200 1.0kb downstream 1.0kb downstream 7227 true Chr09: 18767948-18775174 Gossypium raimondii
Gorai.009G237200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 18774175-18775174 Gossypium raimondii
Gorai.009G237200 2.0kb upstream 2.0kb upstream 8227 true Chr09: 18765948-18774174 Gossypium raimondii
Gorai.009G237200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 18765948-18767947 Gossypium raimondii
Gorai.009G237200 2.0kb downstream 2.0kb downstream 8227 true Chr09: 18767948-18776174 Gossypium raimondii
Gorai.009G237200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 18774175-18776174 Gossypium raimondii
Gorai.009G237200 5.0kb upstream 5.0kb upstream 11227 true Chr09: 18762948-18774174 Gossypium raimondii
Gorai.009G237200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 18762948-18767947 Gossypium raimondii
Gorai.009G237200 5.0kb downstream 5.0kb downstream 11227 true Chr09: 18767948-18779174 Gossypium raimondii
Gorai.009G237200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 18774175-18779174 Gossypium raimondii
Gorai.009G237200 10.0kb upstream 10.0kb upstream 16227 true Chr09: 18757948-18774174 Gossypium raimondii
Gorai.009G237200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 18757948-18767947 Gossypium raimondii
Gorai.009G237200 10.0kb downstream 10.0kb downstream 16227 true Chr09: 18767948-18784174 Gossypium raimondii
Gorai.009G237200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 18774175-18784174 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833019 5264 Brassicales-Malvales View MSA
124345606 5266 SBM View MSA
124238407 5268 Malvidae View MSA
124068908 5270 Rosid View MSA
123737284 5271 Pentapetalae View MSA
122789700 5272 Eudicot View MSA
122042808 5273 Angiosperm View MSA
121349481 5274 Embryophyte View MSA
123381327 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain