Gene : Gorai.005G189200 G. raimondii v2.1
Defline:  (1 of 38) PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  1892
Name:  ? Gorai.005G189200 Secondary Identifier:  ? PAC:26805439
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G189200 0.5kb upstream 0.5kb upstream 4402 true Chr05: 55017468-55021869 Gossypium raimondii
Gorai.005G189200 0.5kb upstream 0.5kb upstream 500 false Chr05: 55017468-55017967 Gossypium raimondii
Gorai.005G189200 0.5kb downstream 0.5kb downstream 4402 true Chr05: 55017968-55022369 Gossypium raimondii
Gorai.005G189200 0.5kb downstream 0.5kb downstream 500 false Chr05: 55021870-55022369 Gossypium raimondii
Gorai.005G189200 1.0kb upstream 1.0kb upstream 4902 true Chr05: 55016968-55021869 Gossypium raimondii
Gorai.005G189200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 55016968-55017967 Gossypium raimondii
Gorai.005G189200 1.0kb downstream 1.0kb downstream 4902 true Chr05: 55017968-55022869 Gossypium raimondii
Gorai.005G189200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 55021870-55022869 Gossypium raimondii
Gorai.005G189200 2.0kb upstream 2.0kb upstream 5902 true Chr05: 55015968-55021869 Gossypium raimondii
Gorai.005G189200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 55015968-55017967 Gossypium raimondii
Gorai.005G189200 2.0kb downstream 2.0kb downstream 5902 true Chr05: 55017968-55023869 Gossypium raimondii
Gorai.005G189200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 55021870-55023869 Gossypium raimondii
Gorai.005G189200 5.0kb upstream 5.0kb upstream 8902 true Chr05: 55012968-55021869 Gossypium raimondii
Gorai.005G189200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 55012968-55017967 Gossypium raimondii
Gorai.005G189200 5.0kb downstream 5.0kb downstream 8902 true Chr05: 55017968-55026869 Gossypium raimondii
Gorai.005G189200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 55021870-55026869 Gossypium raimondii
Gorai.005G189200 10.0kb upstream 10.0kb upstream 13902 true Chr05: 55007968-55021869 Gossypium raimondii
Gorai.005G189200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 55007968-55017967 Gossypium raimondii
Gorai.005G189200 10.0kb downstream 10.0kb downstream 13902 true Chr05: 55017968-55031869 Gossypium raimondii
Gorai.005G189200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 55021870-55031869 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829738 5264 Brassicales-Malvales View MSA
124343628 5266 SBM View MSA
124240850 5268 Malvidae View MSA
124065100 5270 Rosid View MSA
123738721 5271 Pentapetalae View MSA
122787826 5272 Eudicot View MSA
122045787 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121310503 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain