Gene : Gorai.009G060500 G. raimondii v2.1
Defline:  (1 of 2) PTHR11879:SF1 - ASPARTATE AMINOTRANSFERASE, CHLOROPLASTIC Genomic Order:  605
Name:  ? Gorai.009G060500 Secondary Identifier:  ? PAC:26764222
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii ASPARTATE-DEG1-PWY Gossypium raimondii pathologic  
Graimondii ASPARTATESYN-PWY Gossypium raimondii pathologic  
Graimondii PWY-3001 Gossypium raimondii pathologic  
Graimondii PWY-7115 Gossypium raimondii pathologic  
Graimondii PWY-7117 Gossypium raimondii pathologic  
Graimondii THRESYN-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.009G060500 0.5kb upstream 0.5kb upstream 4375 true Chr09: 4334646-4339020 Gossypium raimondii
Gorai.009G060500 0.5kb upstream 0.5kb upstream 500 false Chr09: 4338521-4339020 Gossypium raimondii
Gorai.009G060500 0.5kb downstream 0.5kb downstream 4375 true Chr09: 4334146-4338520 Gossypium raimondii
Gorai.009G060500 0.5kb downstream 0.5kb downstream 500 false Chr09: 4334146-4334645 Gossypium raimondii
Gorai.009G060500 1.0kb upstream 1.0kb upstream 4875 true Chr09: 4334646-4339520 Gossypium raimondii
Gorai.009G060500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 4338521-4339520 Gossypium raimondii
Gorai.009G060500 1.0kb downstream 1.0kb downstream 4875 true Chr09: 4333646-4338520 Gossypium raimondii
Gorai.009G060500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 4333646-4334645 Gossypium raimondii
Gorai.009G060500 2.0kb upstream 2.0kb upstream 5875 true Chr09: 4334646-4340520 Gossypium raimondii
Gorai.009G060500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 4338521-4340520 Gossypium raimondii
Gorai.009G060500 2.0kb downstream 2.0kb downstream 5875 true Chr09: 4332646-4338520 Gossypium raimondii
Gorai.009G060500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 4332646-4334645 Gossypium raimondii
Gorai.009G060500 5.0kb upstream 5.0kb upstream 8875 true Chr09: 4334646-4343520 Gossypium raimondii
Gorai.009G060500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 4338521-4343520 Gossypium raimondii
Gorai.009G060500 5.0kb downstream 5.0kb downstream 8875 true Chr09: 4329646-4338520 Gossypium raimondii
Gorai.009G060500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 4329646-4334645 Gossypium raimondii
Gorai.009G060500 10.0kb upstream 10.0kb upstream 13875 true Chr09: 4334646-4348520 Gossypium raimondii
Gorai.009G060500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 4338521-4348520 Gossypium raimondii
Gorai.009G060500 10.0kb downstream 10.0kb downstream 13875 true Chr09: 4324646-4338520 Gossypium raimondii
Gorai.009G060500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 4324646-4334645 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123810583 5264 Brassicales-Malvales Singleton cluster - no MSA
124307274 5266 SBM Singleton cluster - no MSA
124157289 5268 Malvidae Singleton cluster - no MSA
123881812 5270 Rosid Singleton cluster - no MSA
123464774 5271 Pentapetalae Singleton cluster - no MSA
122797537 5272 Eudicot View MSA
122048100 5273 Angiosperm View MSA
121346908 5274 Embryophyte View MSA
123424622 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain