Gene : Gorai.009G345400 G. raimondii v2.1
Defline:  (1 of 5) PTHR11516//PTHR11516:SF38 - PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR Genomic Order:  3454
Name:  ? Gorai.009G345400 Secondary Identifier:  ? PAC:26770509
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-5173 Gossypium raimondii pathologic  
Graimondii PWY-5464 Gossypium raimondii pathologic  
Graimondii PYRUVDEHYD-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.009G345400 0.5kb upstream 0.5kb upstream 7087 true Chr09: 41522059-41529145 Gossypium raimondii
Gorai.009G345400 0.5kb upstream 0.5kb upstream 500 false Chr09: 41528646-41529145 Gossypium raimondii
Gorai.009G345400 0.5kb downstream 0.5kb downstream 7087 true Chr09: 41521559-41528645 Gossypium raimondii
Gorai.009G345400 0.5kb downstream 0.5kb downstream 500 false Chr09: 41521559-41522058 Gossypium raimondii
Gorai.009G345400 1.0kb upstream 1.0kb upstream 7587 true Chr09: 41522059-41529645 Gossypium raimondii
Gorai.009G345400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 41528646-41529645 Gossypium raimondii
Gorai.009G345400 1.0kb downstream 1.0kb downstream 7587 true Chr09: 41521059-41528645 Gossypium raimondii
Gorai.009G345400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 41521059-41522058 Gossypium raimondii
Gorai.009G345400 2.0kb upstream 2.0kb upstream 8587 true Chr09: 41522059-41530645 Gossypium raimondii
Gorai.009G345400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 41528646-41530645 Gossypium raimondii
Gorai.009G345400 2.0kb downstream 2.0kb downstream 8587 true Chr09: 41520059-41528645 Gossypium raimondii
Gorai.009G345400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 41520059-41522058 Gossypium raimondii
Gorai.009G345400 5.0kb upstream 5.0kb upstream 11587 true Chr09: 41522059-41533645 Gossypium raimondii
Gorai.009G345400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 41528646-41533645 Gossypium raimondii
Gorai.009G345400 5.0kb downstream 5.0kb downstream 11587 true Chr09: 41517059-41528645 Gossypium raimondii
Gorai.009G345400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 41517059-41522058 Gossypium raimondii
Gorai.009G345400 10.0kb upstream 10.0kb upstream 16587 true Chr09: 41522059-41538645 Gossypium raimondii
Gorai.009G345400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 41528646-41538645 Gossypium raimondii
Gorai.009G345400 10.0kb downstream 10.0kb downstream 16587 true Chr09: 41512059-41528645 Gossypium raimondii
Gorai.009G345400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 41512059-41522058 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838646 5264 Brassicales-Malvales View MSA
124346461 5266 SBM View MSA
124239887 5268 Malvidae View MSA
124066466 5270 Rosid View MSA
123744027 5271 Pentapetalae View MSA
122788942 5272 Eudicot View MSA
122045712 5273 Angiosperm View MSA
121344698 5274 Embryophyte View MSA
123425832 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain