Gene : Gorai.009G407600 G. raimondii v2.1
Defline:  (1 of 2) KOG1353 - F0F1-type ATP synthase, alpha subunit Genomic Order:  4076
Name:  ? Gorai.009G407600 Secondary Identifier:  ? PAC:26766143
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-6126 Gossypium raimondii pathologic  
Graimondii PWY-7219 Gossypium raimondii pathologic  
Graimondii PWY-7229 Gossypium raimondii pathologic  
Graimondii PWY-841 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.009G407600 0.5kb upstream 0.5kb upstream 1426 true Chr09: 60387766-60389191 Gossypium raimondii
Gorai.009G407600 0.5kb upstream 0.5kb upstream 500 false Chr09: 60387766-60388265 Gossypium raimondii
Gorai.009G407600 0.5kb downstream 0.5kb downstream 1426 true Chr09: 60388266-60389691 Gossypium raimondii
Gorai.009G407600 0.5kb downstream 0.5kb downstream 500 false Chr09: 60389192-60389691 Gossypium raimondii
Gorai.009G407600 1.0kb upstream 1.0kb upstream 1926 true Chr09: 60387266-60389191 Gossypium raimondii
Gorai.009G407600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 60387266-60388265 Gossypium raimondii
Gorai.009G407600 1.0kb downstream 1.0kb downstream 1926 true Chr09: 60388266-60390191 Gossypium raimondii
Gorai.009G407600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 60389192-60390191 Gossypium raimondii
Gorai.009G407600 2.0kb upstream 2.0kb upstream 2926 true Chr09: 60386266-60389191 Gossypium raimondii
Gorai.009G407600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 60386266-60388265 Gossypium raimondii
Gorai.009G407600 2.0kb downstream 2.0kb downstream 2926 true Chr09: 60388266-60391191 Gossypium raimondii
Gorai.009G407600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 60389192-60391191 Gossypium raimondii
Gorai.009G407600 5.0kb upstream 5.0kb upstream 5926 true Chr09: 60383266-60389191 Gossypium raimondii
Gorai.009G407600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 60383266-60388265 Gossypium raimondii
Gorai.009G407600 5.0kb downstream 5.0kb downstream 5926 true Chr09: 60388266-60394191 Gossypium raimondii
Gorai.009G407600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 60389192-60394191 Gossypium raimondii
Gorai.009G407600 10.0kb upstream 10.0kb upstream 10926 true Chr09: 60378266-60389191 Gossypium raimondii
Gorai.009G407600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 60378266-60388265 Gossypium raimondii
Gorai.009G407600 10.0kb downstream 10.0kb downstream 10926 true Chr09: 60388266-60399191 Gossypium raimondii
Gorai.009G407600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 60389192-60399191 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841829 5264 Brassicales-Malvales View MSA
124323056 5266 SBM View MSA
124253426 5268 Malvidae View MSA
124064158 5270 Rosid View MSA
123753752 5271 Pentapetalae View MSA
122797462 5272 Eudicot View MSA
122051574 5273 Angiosperm View MSA
123429126 5275 Viridiplantae View MSA
121351571 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain