Gene : Gorai.009G010200 G. raimondii v2.1
Defline:  (1 of 2) PTHR13301:SF33 - CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 1 [UDP-FORMING] Genomic Order:  102
Name:  ? Gorai.009G010200 Secondary Identifier:  ? PAC:26764261
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-1001 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.009G010200 0.5kb upstream 0.5kb upstream 7294 true Chr09: 814649-821942 Gossypium raimondii
Gorai.009G010200 0.5kb upstream 0.5kb upstream 500 false Chr09: 821443-821942 Gossypium raimondii
Gorai.009G010200 0.5kb downstream 0.5kb downstream 7294 true Chr09: 814149-821442 Gossypium raimondii
Gorai.009G010200 0.5kb downstream 0.5kb downstream 500 false Chr09: 814149-814648 Gossypium raimondii
Gorai.009G010200 1.0kb upstream 1.0kb upstream 7794 true Chr09: 814649-822442 Gossypium raimondii
Gorai.009G010200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 821443-822442 Gossypium raimondii
Gorai.009G010200 1.0kb downstream 1.0kb downstream 7794 true Chr09: 813649-821442 Gossypium raimondii
Gorai.009G010200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 813649-814648 Gossypium raimondii
Gorai.009G010200 2.0kb upstream 2.0kb upstream 8794 true Chr09: 814649-823442 Gossypium raimondii
Gorai.009G010200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 821443-823442 Gossypium raimondii
Gorai.009G010200 2.0kb downstream 2.0kb downstream 8794 true Chr09: 812649-821442 Gossypium raimondii
Gorai.009G010200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 812649-814648 Gossypium raimondii
Gorai.009G010200 5.0kb upstream 5.0kb upstream 11794 true Chr09: 814649-826442 Gossypium raimondii
Gorai.009G010200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 821443-826442 Gossypium raimondii
Gorai.009G010200 5.0kb downstream 5.0kb downstream 11794 true Chr09: 809649-821442 Gossypium raimondii
Gorai.009G010200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 809649-814648 Gossypium raimondii
Gorai.009G010200 10.0kb upstream 10.0kb upstream 16794 true Chr09: 814649-831442 Gossypium raimondii
Gorai.009G010200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 821443-831442 Gossypium raimondii
Gorai.009G010200 10.0kb downstream 10.0kb downstream 16794 true Chr09: 804649-821442 Gossypium raimondii
Gorai.009G010200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 804649-814648 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827599 5264 Brassicales-Malvales View MSA
124350218 5266 SBM View MSA
124240162 5268 Malvidae View MSA
124068602 5270 Rosid View MSA
123746424 5271 Pentapetalae View MSA
122793475 5272 Eudicot View MSA
122046929 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain