Gene : Gorai.009G234100 G. raimondii v2.1
Defline:  (1 of 1) PTHR11778:SF0 - SERINE--TRNA LIGASE, MITOCHONDRIAL Genomic Order:  2341
Name:  ? Gorai.009G234100 Secondary Identifier:  ? PAC:26769344
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii TRNA-CHARGING-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.009G234100 0.5kb upstream 0.5kb upstream 4481 true Chr09: 18480150-18484630 Gossypium raimondii
Gorai.009G234100 0.5kb upstream 0.5kb upstream 500 false Chr09: 18484131-18484630 Gossypium raimondii
Gorai.009G234100 0.5kb downstream 0.5kb downstream 4481 true Chr09: 18479650-18484130 Gossypium raimondii
Gorai.009G234100 0.5kb downstream 0.5kb downstream 500 false Chr09: 18479650-18480149 Gossypium raimondii
Gorai.009G234100 1.0kb upstream 1.0kb upstream 4981 true Chr09: 18480150-18485130 Gossypium raimondii
Gorai.009G234100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 18484131-18485130 Gossypium raimondii
Gorai.009G234100 1.0kb downstream 1.0kb downstream 4981 true Chr09: 18479150-18484130 Gossypium raimondii
Gorai.009G234100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 18479150-18480149 Gossypium raimondii
Gorai.009G234100 2.0kb upstream 2.0kb upstream 5981 true Chr09: 18480150-18486130 Gossypium raimondii
Gorai.009G234100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 18484131-18486130 Gossypium raimondii
Gorai.009G234100 2.0kb downstream 2.0kb downstream 5981 true Chr09: 18478150-18484130 Gossypium raimondii
Gorai.009G234100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 18478150-18480149 Gossypium raimondii
Gorai.009G234100 5.0kb upstream 5.0kb upstream 8981 true Chr09: 18480150-18489130 Gossypium raimondii
Gorai.009G234100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 18484131-18489130 Gossypium raimondii
Gorai.009G234100 5.0kb downstream 5.0kb downstream 8981 true Chr09: 18475150-18484130 Gossypium raimondii
Gorai.009G234100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 18475150-18480149 Gossypium raimondii
Gorai.009G234100 10.0kb upstream 10.0kb upstream 13981 true Chr09: 18480150-18494130 Gossypium raimondii
Gorai.009G234100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 18484131-18494130 Gossypium raimondii
Gorai.009G234100 10.0kb downstream 10.0kb downstream 13981 true Chr09: 18470150-18484130 Gossypium raimondii
Gorai.009G234100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 18470150-18480149 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833233 5264 Brassicales-Malvales View MSA
124340826 5266 SBM View MSA
124238864 5268 Malvidae View MSA
124074907 5270 Rosid View MSA
123738384 5271 Pentapetalae View MSA
122793450 5272 Eudicot View MSA
122045874 5273 Angiosperm View MSA
121344249 5274 Embryophyte View MSA
123424928 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain