Gene : Gorai.005G200500 G. raimondii v2.1
Defline:  (1 of 2) PTHR15111 - RNA POLYMERASE II SUBUNIT 5-MEDIATING PROTEIN NNX3 Genomic Order:  2005
Name:  ? Gorai.005G200500 Secondary Identifier:  ? PAC:26804243
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G200500 0.5kb upstream 0.5kb upstream 2683 true Chr05: 57610513-57613195 Gossypium raimondii
Gorai.005G200500 0.5kb upstream 0.5kb upstream 500 false Chr05: 57610513-57611012 Gossypium raimondii
Gorai.005G200500 0.5kb downstream 0.5kb downstream 2683 true Chr05: 57611013-57613695 Gossypium raimondii
Gorai.005G200500 0.5kb downstream 0.5kb downstream 500 false Chr05: 57613196-57613695 Gossypium raimondii
Gorai.005G200500 1.0kb upstream 1.0kb upstream 3183 true Chr05: 57610013-57613195 Gossypium raimondii
Gorai.005G200500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 57610013-57611012 Gossypium raimondii
Gorai.005G200500 1.0kb downstream 1.0kb downstream 3183 true Chr05: 57611013-57614195 Gossypium raimondii
Gorai.005G200500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 57613196-57614195 Gossypium raimondii
Gorai.005G200500 2.0kb upstream 2.0kb upstream 4183 true Chr05: 57609013-57613195 Gossypium raimondii
Gorai.005G200500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 57609013-57611012 Gossypium raimondii
Gorai.005G200500 2.0kb downstream 2.0kb downstream 4183 true Chr05: 57611013-57615195 Gossypium raimondii
Gorai.005G200500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 57613196-57615195 Gossypium raimondii
Gorai.005G200500 5.0kb upstream 5.0kb upstream 7183 true Chr05: 57606013-57613195 Gossypium raimondii
Gorai.005G200500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 57606013-57611012 Gossypium raimondii
Gorai.005G200500 5.0kb downstream 5.0kb downstream 7183 true Chr05: 57611013-57618195 Gossypium raimondii
Gorai.005G200500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 57613196-57618195 Gossypium raimondii
Gorai.005G200500 10.0kb upstream 10.0kb upstream 12183 true Chr05: 57601013-57613195 Gossypium raimondii
Gorai.005G200500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 57601013-57611012 Gossypium raimondii
Gorai.005G200500 10.0kb downstream 10.0kb downstream 12183 true Chr05: 57611013-57623195 Gossypium raimondii
Gorai.005G200500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 57613196-57623195 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041391 5273 Angiosperm View MSA
123833888 5264 Brassicales-Malvales View MSA
124344128 5266 SBM View MSA
124241838 5268 Malvidae View MSA
124060568 5270 Rosid View MSA
123741062 5271 Pentapetalae View MSA
122788086 5272 Eudicot View MSA
121345968 5274 Embryophyte View MSA
123425658 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain