Gene : Gorai.009G448400 G. raimondii v2.1
Defline:  (1 of 8) PTHR30128:SF8 - PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A1 Genomic Order:  4484
Name:  ? Gorai.009G448400 Secondary Identifier:  ? PAC:26771318
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PHOTOALL-PWY Gossypium raimondii pathologic  
Graimondii PWY-101 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.009G448400 0.5kb upstream 0.5kb upstream 806 true Chr09: 69948119-69948924 Gossypium raimondii
Gorai.009G448400 0.5kb upstream 0.5kb upstream 500 false Chr09: 69948119-69948618 Gossypium raimondii
Gorai.009G448400 0.5kb downstream 0.5kb downstream 806 true Chr09: 69948619-69949424 Gossypium raimondii
Gorai.009G448400 0.5kb downstream 0.5kb downstream 500 false Chr09: 69948925-69949424 Gossypium raimondii
Gorai.009G448400 1.0kb upstream 1.0kb upstream 1306 true Chr09: 69947619-69948924 Gossypium raimondii
Gorai.009G448400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 69947619-69948618 Gossypium raimondii
Gorai.009G448400 1.0kb downstream 1.0kb downstream 1306 true Chr09: 69948619-69949924 Gossypium raimondii
Gorai.009G448400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 69948925-69949924 Gossypium raimondii
Gorai.009G448400 2.0kb upstream 2.0kb upstream 2306 true Chr09: 69946619-69948924 Gossypium raimondii
Gorai.009G448400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 69946619-69948618 Gossypium raimondii
Gorai.009G448400 2.0kb downstream 2.0kb downstream 2306 true Chr09: 69948619-69950924 Gossypium raimondii
Gorai.009G448400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 69948925-69950924 Gossypium raimondii
Gorai.009G448400 5.0kb upstream 5.0kb upstream 5306 true Chr09: 69943619-69948924 Gossypium raimondii
Gorai.009G448400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 69943619-69948618 Gossypium raimondii
Gorai.009G448400 5.0kb downstream 5.0kb downstream 5306 true Chr09: 69948619-69953924 Gossypium raimondii
Gorai.009G448400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 69948925-69953924 Gossypium raimondii
Gorai.009G448400 10.0kb upstream 10.0kb upstream 10306 true Chr09: 69938619-69948924 Gossypium raimondii
Gorai.009G448400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 69938619-69948618 Gossypium raimondii
Gorai.009G448400 10.0kb downstream 10.0kb downstream 10306 true Chr09: 69948619-69958924 Gossypium raimondii
Gorai.009G448400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 69948925-69958924 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029302 5273 Angiosperm View MSA
123811403 5264 Brassicales-Malvales Singleton cluster - no MSA
124308045 5266 SBM Singleton cluster - no MSA
124157924 5268 Malvidae Singleton cluster - no MSA
124040391 5270 Rosid View MSA
123750830 5271 Pentapetalae View MSA
122773840 5272 Eudicot View MSA
121350541 5274 Embryophyte View MSA
123381782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain