Gene : Gorai.009G173200 G. raimondii v2.1
Defline:  (1 of 2) PTHR12358//PTHR12358:SF42 - SPHINGOSINE KINASE Genomic Order:  1732
Name:  ? Gorai.009G173200 Secondary Identifier:  ? PAC:26766189
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-5129 Gossypium raimondii pathologic  
Graimondii PWY-6483 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.009G173200 0.5kb upstream 0.5kb upstream 4342 true Chr09: 13351790-13356131 Gossypium raimondii
Gorai.009G173200 0.5kb upstream 0.5kb upstream 500 false Chr09: 13355632-13356131 Gossypium raimondii
Gorai.009G173200 0.5kb downstream 0.5kb downstream 4342 true Chr09: 13351290-13355631 Gossypium raimondii
Gorai.009G173200 0.5kb downstream 0.5kb downstream 500 false Chr09: 13351290-13351789 Gossypium raimondii
Gorai.009G173200 1.0kb upstream 1.0kb upstream 4842 true Chr09: 13351790-13356631 Gossypium raimondii
Gorai.009G173200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 13355632-13356631 Gossypium raimondii
Gorai.009G173200 1.0kb downstream 1.0kb downstream 4842 true Chr09: 13350790-13355631 Gossypium raimondii
Gorai.009G173200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 13350790-13351789 Gossypium raimondii
Gorai.009G173200 2.0kb upstream 2.0kb upstream 5842 true Chr09: 13351790-13357631 Gossypium raimondii
Gorai.009G173200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 13355632-13357631 Gossypium raimondii
Gorai.009G173200 2.0kb downstream 2.0kb downstream 5842 true Chr09: 13349790-13355631 Gossypium raimondii
Gorai.009G173200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 13349790-13351789 Gossypium raimondii
Gorai.009G173200 5.0kb upstream 5.0kb upstream 8842 true Chr09: 13351790-13360631 Gossypium raimondii
Gorai.009G173200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 13355632-13360631 Gossypium raimondii
Gorai.009G173200 5.0kb downstream 5.0kb downstream 8842 true Chr09: 13346790-13355631 Gossypium raimondii
Gorai.009G173200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 13346790-13351789 Gossypium raimondii
Gorai.009G173200 10.0kb upstream 10.0kb upstream 13842 true Chr09: 13351790-13365631 Gossypium raimondii
Gorai.009G173200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 13355632-13365631 Gossypium raimondii
Gorai.009G173200 10.0kb downstream 10.0kb downstream 13842 true Chr09: 13341790-13355631 Gossypium raimondii
Gorai.009G173200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 13341790-13351789 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121516181 5273 Angiosperm Singleton cluster - no MSA
123810788 5264 Brassicales-Malvales Singleton cluster - no MSA
124307473 5266 SBM Singleton cluster - no MSA
124157458 5268 Malvidae Singleton cluster - no MSA
123881959 5270 Rosid Singleton cluster - no MSA
123464901 5271 Pentapetalae Singleton cluster - no MSA
122500222 5272 Eudicot Singleton cluster - no MSA
121350923 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain