Gene : Gorai.005G198400 G. raimondii v2.1
Defline:  (1 of 2) PTHR12499 - OPTIC ATROPHY 3 PROTEIN OPA3 Genomic Order:  1984
Name:  ? Gorai.005G198400 Secondary Identifier:  ? PAC:26806248
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G198400 0.5kb upstream 0.5kb upstream 3846 true Chr05: 57299973-57303818 Gossypium raimondii
Gorai.005G198400 0.5kb upstream 0.5kb upstream 500 false Chr05: 57299973-57300472 Gossypium raimondii
Gorai.005G198400 0.5kb downstream 0.5kb downstream 3846 true Chr05: 57300473-57304318 Gossypium raimondii
Gorai.005G198400 0.5kb downstream 0.5kb downstream 500 false Chr05: 57303819-57304318 Gossypium raimondii
Gorai.005G198400 1.0kb upstream 1.0kb upstream 4346 true Chr05: 57299473-57303818 Gossypium raimondii
Gorai.005G198400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 57299473-57300472 Gossypium raimondii
Gorai.005G198400 1.0kb downstream 1.0kb downstream 4346 true Chr05: 57300473-57304818 Gossypium raimondii
Gorai.005G198400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 57303819-57304818 Gossypium raimondii
Gorai.005G198400 2.0kb upstream 2.0kb upstream 5346 true Chr05: 57298473-57303818 Gossypium raimondii
Gorai.005G198400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 57298473-57300472 Gossypium raimondii
Gorai.005G198400 2.0kb downstream 2.0kb downstream 5346 true Chr05: 57300473-57305818 Gossypium raimondii
Gorai.005G198400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 57303819-57305818 Gossypium raimondii
Gorai.005G198400 5.0kb upstream 5.0kb upstream 8346 true Chr05: 57295473-57303818 Gossypium raimondii
Gorai.005G198400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 57295473-57300472 Gossypium raimondii
Gorai.005G198400 5.0kb downstream 5.0kb downstream 8346 true Chr05: 57300473-57308818 Gossypium raimondii
Gorai.005G198400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 57303819-57308818 Gossypium raimondii
Gorai.005G198400 10.0kb upstream 10.0kb upstream 13346 true Chr05: 57290473-57303818 Gossypium raimondii
Gorai.005G198400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 57290473-57300472 Gossypium raimondii
Gorai.005G198400 10.0kb downstream 10.0kb downstream 13346 true Chr05: 57300473-57313818 Gossypium raimondii
Gorai.005G198400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 57303819-57313818 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837367 5264 Brassicales-Malvales View MSA
124346868 5266 SBM View MSA
124239392 5268 Malvidae View MSA
124069580 5270 Rosid View MSA
123743505 5271 Pentapetalae View MSA
122788566 5272 Eudicot View MSA
122047456 5273 Angiosperm View MSA
121344261 5274 Embryophyte View MSA
123428065 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain