Gene : Gorai.005G210000 G. raimondii v2.1
Defline:  (1 of 4) 6.1.1.7 - Alanine--tRNA ligase / Alanyl-tRNA synthetase Genomic Order:  2100
Name:  ? Gorai.005G210000 Secondary Identifier:  ? PAC:26804579
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii TRNA-CHARGING-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G210000 0.5kb upstream 0.5kb upstream 11999 true Chr05: 59081299-59093297 Gossypium raimondii
Gorai.005G210000 0.5kb upstream 0.5kb upstream 500 false Chr05: 59081299-59081798 Gossypium raimondii
Gorai.005G210000 0.5kb downstream 0.5kb downstream 11999 true Chr05: 59081799-59093797 Gossypium raimondii
Gorai.005G210000 0.5kb downstream 0.5kb downstream 500 false Chr05: 59093298-59093797 Gossypium raimondii
Gorai.005G210000 1.0kb upstream 1.0kb upstream 12499 true Chr05: 59080799-59093297 Gossypium raimondii
Gorai.005G210000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 59080799-59081798 Gossypium raimondii
Gorai.005G210000 1.0kb downstream 1.0kb downstream 12499 true Chr05: 59081799-59094297 Gossypium raimondii
Gorai.005G210000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 59093298-59094297 Gossypium raimondii
Gorai.005G210000 2.0kb upstream 2.0kb upstream 13499 true Chr05: 59079799-59093297 Gossypium raimondii
Gorai.005G210000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 59079799-59081798 Gossypium raimondii
Gorai.005G210000 2.0kb downstream 2.0kb downstream 13499 true Chr05: 59081799-59095297 Gossypium raimondii
Gorai.005G210000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 59093298-59095297 Gossypium raimondii
Gorai.005G210000 5.0kb upstream 5.0kb upstream 16499 true Chr05: 59076799-59093297 Gossypium raimondii
Gorai.005G210000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 59076799-59081798 Gossypium raimondii
Gorai.005G210000 5.0kb downstream 5.0kb downstream 16499 true Chr05: 59081799-59098297 Gossypium raimondii
Gorai.005G210000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 59093298-59098297 Gossypium raimondii
Gorai.005G210000 10.0kb upstream 10.0kb upstream 21499 true Chr05: 59071799-59093297 Gossypium raimondii
Gorai.005G210000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 59071799-59081798 Gossypium raimondii
Gorai.005G210000 10.0kb downstream 10.0kb downstream 21499 true Chr05: 59081799-59103297 Gossypium raimondii
Gorai.005G210000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 59093298-59103297 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830021 5264 Brassicales-Malvales View MSA
124341952 5266 SBM View MSA
124240298 5268 Malvidae View MSA
124063784 5270 Rosid View MSA
123740226 5271 Pentapetalae View MSA
122791486 5272 Eudicot View MSA
122047019 5273 Angiosperm View MSA
121346985 5274 Embryophyte View MSA
123424131 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain