Gene : Gorai.005G210500 G. raimondii v2.1
Defline:  (1 of 1) PTHR32010:SF6 - PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC Genomic Order:  2105
Name:  ? Gorai.005G210500 Secondary Identifier:  ? PAC:26801216
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G210500 0.5kb upstream 0.5kb upstream 5808 true Chr05: 59153976-59159783 Gossypium raimondii
Gorai.005G210500 0.5kb upstream 0.5kb upstream 500 false Chr05: 59153976-59154475 Gossypium raimondii
Gorai.005G210500 0.5kb downstream 0.5kb downstream 5808 true Chr05: 59154476-59160283 Gossypium raimondii
Gorai.005G210500 0.5kb downstream 0.5kb downstream 500 false Chr05: 59159784-59160283 Gossypium raimondii
Gorai.005G210500 1.0kb upstream 1.0kb upstream 6308 true Chr05: 59153476-59159783 Gossypium raimondii
Gorai.005G210500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 59153476-59154475 Gossypium raimondii
Gorai.005G210500 1.0kb downstream 1.0kb downstream 6308 true Chr05: 59154476-59160783 Gossypium raimondii
Gorai.005G210500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 59159784-59160783 Gossypium raimondii
Gorai.005G210500 2.0kb upstream 2.0kb upstream 7308 true Chr05: 59152476-59159783 Gossypium raimondii
Gorai.005G210500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 59152476-59154475 Gossypium raimondii
Gorai.005G210500 2.0kb downstream 2.0kb downstream 7308 true Chr05: 59154476-59161783 Gossypium raimondii
Gorai.005G210500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 59159784-59161783 Gossypium raimondii
Gorai.005G210500 5.0kb upstream 5.0kb upstream 10308 true Chr05: 59149476-59159783 Gossypium raimondii
Gorai.005G210500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 59149476-59154475 Gossypium raimondii
Gorai.005G210500 5.0kb downstream 5.0kb downstream 10308 true Chr05: 59154476-59164783 Gossypium raimondii
Gorai.005G210500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 59159784-59164783 Gossypium raimondii
Gorai.005G210500 10.0kb upstream 10.0kb upstream 15308 true Chr05: 59144476-59159783 Gossypium raimondii
Gorai.005G210500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 59144476-59154475 Gossypium raimondii
Gorai.005G210500 10.0kb downstream 10.0kb downstream 15308 true Chr05: 59154476-59169783 Gossypium raimondii
Gorai.005G210500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 59159784-59169783 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827429 5264 Brassicales-Malvales View MSA
124338928 5266 SBM View MSA
124238957 5268 Malvidae View MSA
124062574 5270 Rosid View MSA
123745532 5271 Pentapetalae View MSA
122793353 5272 Eudicot View MSA
122042393 5273 Angiosperm View MSA
121345735 5274 Embryophyte View MSA
123424958 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain