Gene : Gorai.009G050300 G. raimondii v2.1
Defline:  (1 of 2) PTHR10543//PTHR10543:SF30 - BETA-CAROTENE DIOXYGENASE Genomic Order:  503
Name:  ? Gorai.009G050300 Secondary Identifier:  ? PAC:26769013
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-695 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.009G050300 0.5kb upstream 0.5kb upstream 3574 true Chr09: 3645435-3649008 Gossypium raimondii
Gorai.009G050300 0.5kb upstream 0.5kb upstream 500 false Chr09: 3645435-3645934 Gossypium raimondii
Gorai.009G050300 0.5kb downstream 0.5kb downstream 3574 true Chr09: 3645935-3649508 Gossypium raimondii
Gorai.009G050300 0.5kb downstream 0.5kb downstream 500 false Chr09: 3649009-3649508 Gossypium raimondii
Gorai.009G050300 1.0kb upstream 1.0kb upstream 4074 true Chr09: 3644935-3649008 Gossypium raimondii
Gorai.009G050300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 3644935-3645934 Gossypium raimondii
Gorai.009G050300 1.0kb downstream 1.0kb downstream 4074 true Chr09: 3645935-3650008 Gossypium raimondii
Gorai.009G050300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 3649009-3650008 Gossypium raimondii
Gorai.009G050300 2.0kb upstream 2.0kb upstream 5074 true Chr09: 3643935-3649008 Gossypium raimondii
Gorai.009G050300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 3643935-3645934 Gossypium raimondii
Gorai.009G050300 2.0kb downstream 2.0kb downstream 5074 true Chr09: 3645935-3651008 Gossypium raimondii
Gorai.009G050300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 3649009-3651008 Gossypium raimondii
Gorai.009G050300 5.0kb upstream 5.0kb upstream 8074 true Chr09: 3640935-3649008 Gossypium raimondii
Gorai.009G050300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 3640935-3645934 Gossypium raimondii
Gorai.009G050300 5.0kb downstream 5.0kb downstream 8074 true Chr09: 3645935-3654008 Gossypium raimondii
Gorai.009G050300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 3649009-3654008 Gossypium raimondii
Gorai.009G050300 10.0kb upstream 10.0kb upstream 13074 true Chr09: 3635935-3649008 Gossypium raimondii
Gorai.009G050300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 3635935-3645934 Gossypium raimondii
Gorai.009G050300 10.0kb downstream 10.0kb downstream 13074 true Chr09: 3645935-3659008 Gossypium raimondii
Gorai.009G050300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 3649009-3659008 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123811121 5264 Brassicales-Malvales Singleton cluster - no MSA
124307782 5266 SBM Singleton cluster - no MSA
124157706 5268 Malvidae Singleton cluster - no MSA
123882175 5270 Rosid Singleton cluster - no MSA
123465092 5271 Pentapetalae Singleton cluster - no MSA
122500411 5272 Eudicot Singleton cluster - no MSA
122051607 5273 Angiosperm View MSA
121349725 5274 Embryophyte View MSA
123381417 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain