Gene : Gorai.009G154500 G. raimondii v2.1
Defline:  (1 of 3) PTHR11624:SF76 - PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT BETA-2, CHLOROPLASTIC-RELATED Genomic Order:  1545
Name:  ? Gorai.009G154500 Secondary Identifier:  ? PAC:26764820
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-5173 Gossypium raimondii pathologic  
Graimondii PWY-5464 Gossypium raimondii pathologic  
Graimondii PYRUVDEHYD-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.009G154500 0.5kb upstream 0.5kb upstream 3775 true Chr09: 11825631-11829405 Gossypium raimondii
Gorai.009G154500 0.5kb upstream 0.5kb upstream 500 false Chr09: 11825631-11826130 Gossypium raimondii
Gorai.009G154500 0.5kb downstream 0.5kb downstream 3775 true Chr09: 11826131-11829905 Gossypium raimondii
Gorai.009G154500 0.5kb downstream 0.5kb downstream 500 false Chr09: 11829406-11829905 Gossypium raimondii
Gorai.009G154500 1.0kb upstream 1.0kb upstream 4275 true Chr09: 11825131-11829405 Gossypium raimondii
Gorai.009G154500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 11825131-11826130 Gossypium raimondii
Gorai.009G154500 1.0kb downstream 1.0kb downstream 4275 true Chr09: 11826131-11830405 Gossypium raimondii
Gorai.009G154500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 11829406-11830405 Gossypium raimondii
Gorai.009G154500 2.0kb upstream 2.0kb upstream 5275 true Chr09: 11824131-11829405 Gossypium raimondii
Gorai.009G154500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 11824131-11826130 Gossypium raimondii
Gorai.009G154500 2.0kb downstream 2.0kb downstream 5275 true Chr09: 11826131-11831405 Gossypium raimondii
Gorai.009G154500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 11829406-11831405 Gossypium raimondii
Gorai.009G154500 5.0kb upstream 5.0kb upstream 8275 true Chr09: 11821131-11829405 Gossypium raimondii
Gorai.009G154500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 11821131-11826130 Gossypium raimondii
Gorai.009G154500 5.0kb downstream 5.0kb downstream 8275 true Chr09: 11826131-11834405 Gossypium raimondii
Gorai.009G154500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 11829406-11834405 Gossypium raimondii
Gorai.009G154500 10.0kb upstream 10.0kb upstream 13275 true Chr09: 11816131-11829405 Gossypium raimondii
Gorai.009G154500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 11816131-11826130 Gossypium raimondii
Gorai.009G154500 10.0kb downstream 10.0kb downstream 13275 true Chr09: 11826131-11839405 Gossypium raimondii
Gorai.009G154500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 11829406-11839405 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123810642 5264 Brassicales-Malvales Singleton cluster - no MSA
124307332 5266 SBM Singleton cluster - no MSA
124157340 5268 Malvidae Singleton cluster - no MSA
123881853 5270 Rosid Singleton cluster - no MSA
123464809 5271 Pentapetalae Singleton cluster - no MSA
122500130 5272 Eudicot Singleton cluster - no MSA
122045305 5273 Angiosperm View MSA
121346397 5274 Embryophyte View MSA
123428672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain