Gene : Gorai.005G211800 G. raimondii v2.1
Defline:  (1 of 4) PTHR22763:SF5 - E3 UBIQUITIN-PROTEIN LIGASE CIP8 Genomic Order:  2118
Name:  ? Gorai.005G211800 Secondary Identifier:  ? PAC:26805204
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-7511 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G211800 0.5kb upstream 0.5kb upstream 5192 true Chr05: 59290518-59295709 Gossypium raimondii
Gorai.005G211800 0.5kb upstream 0.5kb upstream 500 false Chr05: 59290518-59291017 Gossypium raimondii
Gorai.005G211800 0.5kb downstream 0.5kb downstream 5192 true Chr05: 59291018-59296209 Gossypium raimondii
Gorai.005G211800 0.5kb downstream 0.5kb downstream 500 false Chr05: 59295710-59296209 Gossypium raimondii
Gorai.005G211800 1.0kb upstream 1.0kb upstream 5692 true Chr05: 59290018-59295709 Gossypium raimondii
Gorai.005G211800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 59290018-59291017 Gossypium raimondii
Gorai.005G211800 1.0kb downstream 1.0kb downstream 5692 true Chr05: 59291018-59296709 Gossypium raimondii
Gorai.005G211800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 59295710-59296709 Gossypium raimondii
Gorai.005G211800 2.0kb upstream 2.0kb upstream 6692 true Chr05: 59289018-59295709 Gossypium raimondii
Gorai.005G211800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 59289018-59291017 Gossypium raimondii
Gorai.005G211800 2.0kb downstream 2.0kb downstream 6692 true Chr05: 59291018-59297709 Gossypium raimondii
Gorai.005G211800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 59295710-59297709 Gossypium raimondii
Gorai.005G211800 5.0kb upstream 5.0kb upstream 9692 true Chr05: 59286018-59295709 Gossypium raimondii
Gorai.005G211800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 59286018-59291017 Gossypium raimondii
Gorai.005G211800 5.0kb downstream 5.0kb downstream 9692 true Chr05: 59291018-59300709 Gossypium raimondii
Gorai.005G211800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 59295710-59300709 Gossypium raimondii
Gorai.005G211800 10.0kb upstream 10.0kb upstream 14692 true Chr05: 59281018-59295709 Gossypium raimondii
Gorai.005G211800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 59281018-59291017 Gossypium raimondii
Gorai.005G211800 10.0kb downstream 10.0kb downstream 14692 true Chr05: 59291018-59305709 Gossypium raimondii
Gorai.005G211800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 59295710-59305709 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123807407 5264 Brassicales-Malvales Singleton cluster - no MSA
124304276 5266 SBM Singleton cluster - no MSA
124154825 5268 Malvidae Singleton cluster - no MSA
124062824 5270 Rosid View MSA
123753393 5271 Pentapetalae View MSA
122788391 5272 Eudicot View MSA
122050385 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain