Gene : Gorai.009G043200 G. raimondii v2.1
Defline:  (1 of 10) 5.4.99.8 - Cycloartenol synthase / 2,3-epoxysqualene--cycloartenol cyclase Genomic Order:  432
Name:  ? Gorai.009G043200 Secondary Identifier:  ? PAC:26766814
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-2541 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.009G043200 0.5kb upstream 0.5kb upstream 2813 true Chr09: 3158931-3161743 Gossypium raimondii
Gorai.009G043200 0.5kb upstream 0.5kb upstream 500 false Chr09: 3158931-3159430 Gossypium raimondii
Gorai.009G043200 0.5kb downstream 0.5kb downstream 2813 true Chr09: 3159431-3162243 Gossypium raimondii
Gorai.009G043200 0.5kb downstream 0.5kb downstream 500 false Chr09: 3161744-3162243 Gossypium raimondii
Gorai.009G043200 1.0kb upstream 1.0kb upstream 3313 true Chr09: 3158431-3161743 Gossypium raimondii
Gorai.009G043200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 3158431-3159430 Gossypium raimondii
Gorai.009G043200 1.0kb downstream 1.0kb downstream 3313 true Chr09: 3159431-3162743 Gossypium raimondii
Gorai.009G043200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 3161744-3162743 Gossypium raimondii
Gorai.009G043200 2.0kb upstream 2.0kb upstream 4313 true Chr09: 3157431-3161743 Gossypium raimondii
Gorai.009G043200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 3157431-3159430 Gossypium raimondii
Gorai.009G043200 2.0kb downstream 2.0kb downstream 4313 true Chr09: 3159431-3163743 Gossypium raimondii
Gorai.009G043200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 3161744-3163743 Gossypium raimondii
Gorai.009G043200 5.0kb upstream 5.0kb upstream 7313 true Chr09: 3154431-3161743 Gossypium raimondii
Gorai.009G043200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 3154431-3159430 Gossypium raimondii
Gorai.009G043200 5.0kb downstream 5.0kb downstream 7313 true Chr09: 3159431-3166743 Gossypium raimondii
Gorai.009G043200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 3161744-3166743 Gossypium raimondii
Gorai.009G043200 10.0kb upstream 10.0kb upstream 12313 true Chr09: 3149431-3161743 Gossypium raimondii
Gorai.009G043200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 3149431-3159430 Gossypium raimondii
Gorai.009G043200 10.0kb downstream 10.0kb downstream 12313 true Chr09: 3159431-3171743 Gossypium raimondii
Gorai.009G043200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 3161744-3171743 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029665 5273 Angiosperm View MSA
123814834 5264 Brassicales-Malvales View MSA
124311303 5266 SBM View MSA
124160608 5268 Malvidae View MSA
124074018 5270 Rosid View MSA
123628485 5271 Pentapetalae View MSA
122662757 5272 Eudicot View MSA
121298968 5274 Embryophyte View MSA
123336900 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain