Gene : Gorai.009G143400 G. raimondii v2.1
Defline:  (1 of 1) PTHR11533//PTHR11533:SF177 - PROTEASE M1 ZINC METALLOPROTEASE Genomic Order:  1434
Name:  ? Gorai.009G143400 Secondary Identifier:  ? PAC:26767710
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-6842 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.009G143400 0.5kb upstream 0.5kb upstream 7298 true Chr09: 10860498-10867795 Gossypium raimondii
Gorai.009G143400 0.5kb upstream 0.5kb upstream 500 false Chr09: 10867296-10867795 Gossypium raimondii
Gorai.009G143400 0.5kb downstream 0.5kb downstream 7298 true Chr09: 10859998-10867295 Gossypium raimondii
Gorai.009G143400 0.5kb downstream 0.5kb downstream 500 false Chr09: 10859998-10860497 Gossypium raimondii
Gorai.009G143400 1.0kb upstream 1.0kb upstream 7798 true Chr09: 10860498-10868295 Gossypium raimondii
Gorai.009G143400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 10867296-10868295 Gossypium raimondii
Gorai.009G143400 1.0kb downstream 1.0kb downstream 7798 true Chr09: 10859498-10867295 Gossypium raimondii
Gorai.009G143400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 10859498-10860497 Gossypium raimondii
Gorai.009G143400 2.0kb upstream 2.0kb upstream 8798 true Chr09: 10860498-10869295 Gossypium raimondii
Gorai.009G143400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 10867296-10869295 Gossypium raimondii
Gorai.009G143400 2.0kb downstream 2.0kb downstream 8798 true Chr09: 10858498-10867295 Gossypium raimondii
Gorai.009G143400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 10858498-10860497 Gossypium raimondii
Gorai.009G143400 5.0kb upstream 5.0kb upstream 11798 true Chr09: 10860498-10872295 Gossypium raimondii
Gorai.009G143400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 10867296-10872295 Gossypium raimondii
Gorai.009G143400 5.0kb downstream 5.0kb downstream 11798 true Chr09: 10855498-10867295 Gossypium raimondii
Gorai.009G143400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 10855498-10860497 Gossypium raimondii
Gorai.009G143400 10.0kb upstream 10.0kb upstream 16798 true Chr09: 10860498-10877295 Gossypium raimondii
Gorai.009G143400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 10867296-10877295 Gossypium raimondii
Gorai.009G143400 10.0kb downstream 10.0kb downstream 16798 true Chr09: 10850498-10867295 Gossypium raimondii
Gorai.009G143400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 10850498-10860497 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825489 5264 Brassicales-Malvales View MSA
124347597 5266 SBM View MSA
124247440 5268 Malvidae View MSA
124071503 5270 Rosid View MSA
123744499 5271 Pentapetalae View MSA
122771111 5272 Eudicot View MSA
122045992 5273 Angiosperm View MSA
121349880 5274 Embryophyte View MSA
123428340 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain