Gene : Gorai.009G345000 G. raimondii v2.1
Defline:  (1 of 1) 3.4.24.34 - Neutrophil collagenase / Matrix metalloproteinase 8 Genomic Order:  3450
Name:  ? Gorai.009G345000 Secondary Identifier:  ? PAC:26769285
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.009G345000 0.5kb upstream 0.5kb upstream 1771 true Chr09: 41328222-41329992 Gossypium raimondii
Gorai.009G345000 0.5kb upstream 0.5kb upstream 500 false Chr09: 41329493-41329992 Gossypium raimondii
Gorai.009G345000 0.5kb downstream 0.5kb downstream 1771 true Chr09: 41327722-41329492 Gossypium raimondii
Gorai.009G345000 0.5kb downstream 0.5kb downstream 500 false Chr09: 41327722-41328221 Gossypium raimondii
Gorai.009G345000 1.0kb upstream 1.0kb upstream 2271 true Chr09: 41328222-41330492 Gossypium raimondii
Gorai.009G345000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 41329493-41330492 Gossypium raimondii
Gorai.009G345000 1.0kb downstream 1.0kb downstream 2271 true Chr09: 41327222-41329492 Gossypium raimondii
Gorai.009G345000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 41327222-41328221 Gossypium raimondii
Gorai.009G345000 2.0kb upstream 2.0kb upstream 3271 true Chr09: 41328222-41331492 Gossypium raimondii
Gorai.009G345000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 41329493-41331492 Gossypium raimondii
Gorai.009G345000 2.0kb downstream 2.0kb downstream 3271 true Chr09: 41326222-41329492 Gossypium raimondii
Gorai.009G345000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 41326222-41328221 Gossypium raimondii
Gorai.009G345000 5.0kb upstream 5.0kb upstream 6271 true Chr09: 41328222-41334492 Gossypium raimondii
Gorai.009G345000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 41329493-41334492 Gossypium raimondii
Gorai.009G345000 5.0kb downstream 5.0kb downstream 6271 true Chr09: 41323222-41329492 Gossypium raimondii
Gorai.009G345000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 41323222-41328221 Gossypium raimondii
Gorai.009G345000 10.0kb upstream 10.0kb upstream 11271 true Chr09: 41328222-41339492 Gossypium raimondii
Gorai.009G345000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 41329493-41339492 Gossypium raimondii
Gorai.009G345000 10.0kb downstream 10.0kb downstream 11271 true Chr09: 41318222-41329492 Gossypium raimondii
Gorai.009G345000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 41318222-41328221 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041440 5273 Angiosperm View MSA
123811154 5264 Brassicales-Malvales Singleton cluster - no MSA
124350845 5266 SBM View MSA
124249735 5268 Malvidae View MSA
124061806 5270 Rosid View MSA
123745217 5271 Pentapetalae View MSA
122786222 5272 Eudicot View MSA
121350353 5274 Embryophyte View MSA
123381692 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain