Gene : Gorai.009G341100 G. raimondii v2.1
Defline:  (1 of 2) PTHR23023:SF141 - INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA3-RELATED Genomic Order:  3411
Name:  ? Gorai.009G341100 Secondary Identifier:  ? PAC:26766248
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWYDQC-4 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.009G341100 0.5kb upstream 0.5kb upstream 2255 true Chr09: 39560576-39562830 Gossypium raimondii
Gorai.009G341100 0.5kb upstream 0.5kb upstream 500 false Chr09: 39562331-39562830 Gossypium raimondii
Gorai.009G341100 0.5kb downstream 0.5kb downstream 2255 true Chr09: 39560076-39562330 Gossypium raimondii
Gorai.009G341100 0.5kb downstream 0.5kb downstream 500 false Chr09: 39560076-39560575 Gossypium raimondii
Gorai.009G341100 1.0kb upstream 1.0kb upstream 2755 true Chr09: 39560576-39563330 Gossypium raimondii
Gorai.009G341100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 39562331-39563330 Gossypium raimondii
Gorai.009G341100 1.0kb downstream 1.0kb downstream 2755 true Chr09: 39559576-39562330 Gossypium raimondii
Gorai.009G341100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 39559576-39560575 Gossypium raimondii
Gorai.009G341100 2.0kb upstream 2.0kb upstream 3755 true Chr09: 39560576-39564330 Gossypium raimondii
Gorai.009G341100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 39562331-39564330 Gossypium raimondii
Gorai.009G341100 2.0kb downstream 2.0kb downstream 3755 true Chr09: 39558576-39562330 Gossypium raimondii
Gorai.009G341100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 39558576-39560575 Gossypium raimondii
Gorai.009G341100 5.0kb upstream 5.0kb upstream 6755 true Chr09: 39560576-39567330 Gossypium raimondii
Gorai.009G341100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 39562331-39567330 Gossypium raimondii
Gorai.009G341100 5.0kb downstream 5.0kb downstream 6755 true Chr09: 39555576-39562330 Gossypium raimondii
Gorai.009G341100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 39555576-39560575 Gossypium raimondii
Gorai.009G341100 10.0kb upstream 10.0kb upstream 11755 true Chr09: 39560576-39572330 Gossypium raimondii
Gorai.009G341100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 39562331-39572330 Gossypium raimondii
Gorai.009G341100 10.0kb downstream 10.0kb downstream 11755 true Chr09: 39550576-39562330 Gossypium raimondii
Gorai.009G341100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 39550576-39560575 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123810796 5264 Brassicales-Malvales Singleton cluster - no MSA
124307478 5266 SBM Singleton cluster - no MSA
124157462 5268 Malvidae Singleton cluster - no MSA
124073695 5270 Rosid View MSA
123751619 5271 Pentapetalae View MSA
122797534 5272 Eudicot View MSA
122049474 5273 Angiosperm View MSA
121351632 5274 Embryophyte View MSA
123426700 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain