Gene : Gorai.005G228600 G. raimondii v2.1
Defline:  (1 of 3) PTHR12300//PTHR12300:SF60 - HVA22-LIKE PROTEINS Genomic Order:  2286
Name:  ? Gorai.005G228600 Secondary Identifier:  ? PAC:26805170
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G228600 0.5kb upstream 0.5kb upstream 4671 true Chr05: 61164101-61168771 Gossypium raimondii
Gorai.005G228600 0.5kb upstream 0.5kb upstream 500 false Chr05: 61164101-61164600 Gossypium raimondii
Gorai.005G228600 0.5kb downstream 0.5kb downstream 4671 true Chr05: 61164601-61169271 Gossypium raimondii
Gorai.005G228600 0.5kb downstream 0.5kb downstream 500 false Chr05: 61168772-61169271 Gossypium raimondii
Gorai.005G228600 1.0kb upstream 1.0kb upstream 5171 true Chr05: 61163601-61168771 Gossypium raimondii
Gorai.005G228600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 61163601-61164600 Gossypium raimondii
Gorai.005G228600 1.0kb downstream 1.0kb downstream 5171 true Chr05: 61164601-61169771 Gossypium raimondii
Gorai.005G228600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 61168772-61169771 Gossypium raimondii
Gorai.005G228600 2.0kb upstream 2.0kb upstream 6171 true Chr05: 61162601-61168771 Gossypium raimondii
Gorai.005G228600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 61162601-61164600 Gossypium raimondii
Gorai.005G228600 2.0kb downstream 2.0kb downstream 6171 true Chr05: 61164601-61170771 Gossypium raimondii
Gorai.005G228600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 61168772-61170771 Gossypium raimondii
Gorai.005G228600 5.0kb upstream 5.0kb upstream 9171 true Chr05: 61159601-61168771 Gossypium raimondii
Gorai.005G228600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 61159601-61164600 Gossypium raimondii
Gorai.005G228600 5.0kb downstream 5.0kb downstream 9171 true Chr05: 61164601-61173771 Gossypium raimondii
Gorai.005G228600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 61168772-61173771 Gossypium raimondii
Gorai.005G228600 10.0kb upstream 10.0kb upstream 14171 true Chr05: 61154601-61168771 Gossypium raimondii
Gorai.005G228600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 61154601-61164600 Gossypium raimondii
Gorai.005G228600 10.0kb downstream 10.0kb downstream 14171 true Chr05: 61164601-61178771 Gossypium raimondii
Gorai.005G228600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 61168772-61178771 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123807402 5264 Brassicales-Malvales Singleton cluster - no MSA
124304271 5266 SBM Singleton cluster - no MSA
124253444 5268 Malvidae View MSA
124070048 5270 Rosid View MSA
123739293 5271 Pentapetalae View MSA
122793749 5272 Eudicot View MSA
122049785 5273 Angiosperm View MSA
121348295 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain