Gene : Gorai.005G228000 G. raimondii v2.1
Defline:  (1 of 2) PTHR10381:SF8 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 6, CHLOROPLASTIC Genomic Order:  2280
Name:  ? Gorai.005G228000 Secondary Identifier:  ? PAC:26802819
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G228000 0.5kb upstream 0.5kb upstream 3616 true Chr05: 61090285-61093900 Gossypium raimondii
Gorai.005G228000 0.5kb upstream 0.5kb upstream 500 false Chr05: 61090285-61090784 Gossypium raimondii
Gorai.005G228000 0.5kb downstream 0.5kb downstream 3616 true Chr05: 61090785-61094400 Gossypium raimondii
Gorai.005G228000 0.5kb downstream 0.5kb downstream 500 false Chr05: 61093901-61094400 Gossypium raimondii
Gorai.005G228000 1.0kb upstream 1.0kb upstream 4116 true Chr05: 61089785-61093900 Gossypium raimondii
Gorai.005G228000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 61089785-61090784 Gossypium raimondii
Gorai.005G228000 1.0kb downstream 1.0kb downstream 4116 true Chr05: 61090785-61094900 Gossypium raimondii
Gorai.005G228000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 61093901-61094900 Gossypium raimondii
Gorai.005G228000 2.0kb upstream 2.0kb upstream 5116 true Chr05: 61088785-61093900 Gossypium raimondii
Gorai.005G228000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 61088785-61090784 Gossypium raimondii
Gorai.005G228000 2.0kb downstream 2.0kb downstream 5116 true Chr05: 61090785-61095900 Gossypium raimondii
Gorai.005G228000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 61093901-61095900 Gossypium raimondii
Gorai.005G228000 5.0kb upstream 5.0kb upstream 8116 true Chr05: 61085785-61093900 Gossypium raimondii
Gorai.005G228000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 61085785-61090784 Gossypium raimondii
Gorai.005G228000 5.0kb downstream 5.0kb downstream 8116 true Chr05: 61090785-61098900 Gossypium raimondii
Gorai.005G228000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 61093901-61098900 Gossypium raimondii
Gorai.005G228000 10.0kb upstream 10.0kb upstream 13116 true Chr05: 61080785-61093900 Gossypium raimondii
Gorai.005G228000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 61080785-61090784 Gossypium raimondii
Gorai.005G228000 10.0kb downstream 10.0kb downstream 13116 true Chr05: 61090785-61103900 Gossypium raimondii
Gorai.005G228000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 61093901-61103900 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841617 5264 Brassicales-Malvales View MSA
124340575 5266 SBM View MSA
124240100 5268 Malvidae View MSA
124064869 5270 Rosid View MSA
123736834 5271 Pentapetalae View MSA
122789867 5272 Eudicot View MSA
122046874 5273 Angiosperm View MSA
121344835 5274 Embryophyte View MSA
123426609 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain