Gene : Gorai.010G045700 G. raimondii v2.1

Defline:  (1 of 6) PTHR22952:SF180 - TRANSCRIPTION FACTOR TGA1-RELATED Genomic Order:  457
Name:  ? Gorai.010G045700 Secondary Identifier:  ? PAC:26760525

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.010G045700 0.5kb upstream 0.5kb upstream 4784 true Chr10: 4849143-4853926 Gossypium raimondii
Gorai.010G045700 0.5kb upstream 0.5kb upstream 500 false Chr10: 4849143-4849642 Gossypium raimondii
Gorai.010G045700 0.5kb downstream 0.5kb downstream 4784 true Chr10: 4849643-4854426 Gossypium raimondii
Gorai.010G045700 0.5kb downstream 0.5kb downstream 500 false Chr10: 4853927-4854426 Gossypium raimondii
Gorai.010G045700 1.0kb upstream 1.0kb upstream 5284 true Chr10: 4848643-4853926 Gossypium raimondii
Gorai.010G045700 1.0kb upstream 1.0kb upstream 1000 false Chr10: 4848643-4849642 Gossypium raimondii
Gorai.010G045700 1.0kb downstream 1.0kb downstream 5284 true Chr10: 4849643-4854926 Gossypium raimondii
Gorai.010G045700 1.0kb downstream 1.0kb downstream 1000 false Chr10: 4853927-4854926 Gossypium raimondii
Gorai.010G045700 2.0kb upstream 2.0kb upstream 6284 true Chr10: 4847643-4853926 Gossypium raimondii
Gorai.010G045700 2.0kb upstream 2.0kb upstream 2000 false Chr10: 4847643-4849642 Gossypium raimondii
Gorai.010G045700 2.0kb downstream 2.0kb downstream 6284 true Chr10: 4849643-4855926 Gossypium raimondii
Gorai.010G045700 2.0kb downstream 2.0kb downstream 2000 false Chr10: 4853927-4855926 Gossypium raimondii
Gorai.010G045700 5.0kb upstream 5.0kb upstream 9284 true Chr10: 4844643-4853926 Gossypium raimondii
Gorai.010G045700 5.0kb upstream 5.0kb upstream 5000 false Chr10: 4844643-4849642 Gossypium raimondii
Gorai.010G045700 5.0kb downstream 5.0kb downstream 9284 true Chr10: 4849643-4858926 Gossypium raimondii
Gorai.010G045700 5.0kb downstream 5.0kb downstream 5000 false Chr10: 4853927-4858926 Gossypium raimondii
Gorai.010G045700 10.0kb upstream 10.0kb upstream 14284 true Chr10: 4839643-4853926 Gossypium raimondii
Gorai.010G045700 10.0kb upstream 10.0kb upstream 10000 false Chr10: 4839643-4849642 Gossypium raimondii
Gorai.010G045700 10.0kb downstream 10.0kb downstream 14284 true Chr10: 4849643-4863926 Gossypium raimondii
Gorai.010G045700 10.0kb downstream 10.0kb downstream 10000 false Chr10: 4853927-4863926 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838998 5264 Brassicales-Malvales View MSA
124351040 5266 SBM View MSA
124237534 5268 Malvidae View MSA
124071998 5270 Rosid View MSA
123743683 5271 Pentapetalae View MSA
122792849 5272 Eudicot View MSA
122045464 5273 Angiosperm View MSA
121310452 5274 Embryophyte View MSA
123347930 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain