Gene : Gorai.010G042800 G. raimondii v2.1
Defline:  (1 of 25) KOG0978 - E3 ubiquitin ligase involved in syntaxin degradation Genomic Order:  428
Name:  ? Gorai.010G042800 Secondary Identifier:  ? PAC:26758146
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.010G042800 0.5kb upstream 0.5kb upstream 7207 true Chr10: 4083107-4090313 Gossypium raimondii
Gorai.010G042800 0.5kb upstream 0.5kb upstream 500 false Chr10: 4083107-4083606 Gossypium raimondii
Gorai.010G042800 0.5kb downstream 0.5kb downstream 7207 true Chr10: 4083607-4090813 Gossypium raimondii
Gorai.010G042800 0.5kb downstream 0.5kb downstream 500 false Chr10: 4090314-4090813 Gossypium raimondii
Gorai.010G042800 1.0kb upstream 1.0kb upstream 7707 true Chr10: 4082607-4090313 Gossypium raimondii
Gorai.010G042800 1.0kb upstream 1.0kb upstream 1000 false Chr10: 4082607-4083606 Gossypium raimondii
Gorai.010G042800 1.0kb downstream 1.0kb downstream 7707 true Chr10: 4083607-4091313 Gossypium raimondii
Gorai.010G042800 1.0kb downstream 1.0kb downstream 1000 false Chr10: 4090314-4091313 Gossypium raimondii
Gorai.010G042800 2.0kb upstream 2.0kb upstream 8707 true Chr10: 4081607-4090313 Gossypium raimondii
Gorai.010G042800 2.0kb upstream 2.0kb upstream 2000 false Chr10: 4081607-4083606 Gossypium raimondii
Gorai.010G042800 2.0kb downstream 2.0kb downstream 8707 true Chr10: 4083607-4092313 Gossypium raimondii
Gorai.010G042800 2.0kb downstream 2.0kb downstream 2000 false Chr10: 4090314-4092313 Gossypium raimondii
Gorai.010G042800 5.0kb upstream 5.0kb upstream 11707 true Chr10: 4078607-4090313 Gossypium raimondii
Gorai.010G042800 5.0kb upstream 5.0kb upstream 5000 false Chr10: 4078607-4083606 Gossypium raimondii
Gorai.010G042800 5.0kb downstream 5.0kb downstream 11707 true Chr10: 4083607-4095313 Gossypium raimondii
Gorai.010G042800 5.0kb downstream 5.0kb downstream 5000 false Chr10: 4090314-4095313 Gossypium raimondii
Gorai.010G042800 10.0kb upstream 10.0kb upstream 16707 true Chr10: 4073607-4090313 Gossypium raimondii
Gorai.010G042800 10.0kb upstream 10.0kb upstream 10000 false Chr10: 4073607-4083606 Gossypium raimondii
Gorai.010G042800 10.0kb downstream 10.0kb downstream 16707 true Chr10: 4083607-4100313 Gossypium raimondii
Gorai.010G042800 10.0kb downstream 10.0kb downstream 10000 false Chr10: 4090314-4100313 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834299 5264 Brassicales-Malvales View MSA
124339610 5266 SBM View MSA
124237779 5268 Malvidae View MSA
124073951 5270 Rosid View MSA
123751263 5271 Pentapetalae View MSA
122794773 5272 Eudicot View MSA
122048313 5273 Angiosperm View MSA
121348283 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain