Gene : Gorai.009G161700 G. raimondii v2.1
Defline:  (1 of 2) PTHR22952:SF210 - DOG1 ALPHA SPLICE VARIANT Genomic Order:  1617
Name:  ? Gorai.009G161700 Secondary Identifier:  ? PAC:26767664
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.009G161700 0.5kb upstream 0.5kb upstream 2836 true Chr09: 12417096-12419931 Gossypium raimondii
Gorai.009G161700 0.5kb upstream 0.5kb upstream 500 false Chr09: 12419432-12419931 Gossypium raimondii
Gorai.009G161700 0.5kb downstream 0.5kb downstream 2836 true Chr09: 12416596-12419431 Gossypium raimondii
Gorai.009G161700 0.5kb downstream 0.5kb downstream 500 false Chr09: 12416596-12417095 Gossypium raimondii
Gorai.009G161700 1.0kb upstream 1.0kb upstream 3336 true Chr09: 12417096-12420431 Gossypium raimondii
Gorai.009G161700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 12419432-12420431 Gossypium raimondii
Gorai.009G161700 1.0kb downstream 1.0kb downstream 3336 true Chr09: 12416096-12419431 Gossypium raimondii
Gorai.009G161700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 12416096-12417095 Gossypium raimondii
Gorai.009G161700 2.0kb upstream 2.0kb upstream 4336 true Chr09: 12417096-12421431 Gossypium raimondii
Gorai.009G161700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 12419432-12421431 Gossypium raimondii
Gorai.009G161700 2.0kb downstream 2.0kb downstream 4336 true Chr09: 12415096-12419431 Gossypium raimondii
Gorai.009G161700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 12415096-12417095 Gossypium raimondii
Gorai.009G161700 5.0kb upstream 5.0kb upstream 7336 true Chr09: 12417096-12424431 Gossypium raimondii
Gorai.009G161700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 12419432-12424431 Gossypium raimondii
Gorai.009G161700 5.0kb downstream 5.0kb downstream 7336 true Chr09: 12412096-12419431 Gossypium raimondii
Gorai.009G161700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 12412096-12417095 Gossypium raimondii
Gorai.009G161700 10.0kb upstream 10.0kb upstream 12336 true Chr09: 12417096-12429431 Gossypium raimondii
Gorai.009G161700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 12419432-12429431 Gossypium raimondii
Gorai.009G161700 10.0kb downstream 10.0kb downstream 12336 true Chr09: 12407096-12419431 Gossypium raimondii
Gorai.009G161700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 12407096-12417095 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835440 5264 Brassicales-Malvales View MSA
124322052 5266 SBM View MSA
124250601 5268 Malvidae View MSA
124070916 5270 Rosid View MSA
123746178 5271 Pentapetalae View MSA
122797836 5272 Eudicot View MSA
122044806 5273 Angiosperm View MSA
121350176 5274 Embryophyte View MSA
123381607 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain