Gene : Gorai.009G244400 G. raimondii v2.1
Defline:  (1 of 2) PTHR31423:SF3 - PROLYL-TRNA SYNTHETASE ASSOCIATED DOMAIN-CONTAINING PROTEIN 1-RELATED Genomic Order:  2444
Name:  ? Gorai.009G244400 Secondary Identifier:  ? PAC:26762733
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii TRNA-CHARGING-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.009G244400 0.5kb upstream 0.5kb upstream 4998 true Chr09: 19622827-19627824 Gossypium raimondii
Gorai.009G244400 0.5kb upstream 0.5kb upstream 500 false Chr09: 19627325-19627824 Gossypium raimondii
Gorai.009G244400 0.5kb downstream 0.5kb downstream 4998 true Chr09: 19622327-19627324 Gossypium raimondii
Gorai.009G244400 0.5kb downstream 0.5kb downstream 500 false Chr09: 19622327-19622826 Gossypium raimondii
Gorai.009G244400 1.0kb upstream 1.0kb upstream 5498 true Chr09: 19622827-19628324 Gossypium raimondii
Gorai.009G244400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 19627325-19628324 Gossypium raimondii
Gorai.009G244400 1.0kb downstream 1.0kb downstream 5498 true Chr09: 19621827-19627324 Gossypium raimondii
Gorai.009G244400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 19621827-19622826 Gossypium raimondii
Gorai.009G244400 2.0kb upstream 2.0kb upstream 6498 true Chr09: 19622827-19629324 Gossypium raimondii
Gorai.009G244400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 19627325-19629324 Gossypium raimondii
Gorai.009G244400 2.0kb downstream 2.0kb downstream 6498 true Chr09: 19620827-19627324 Gossypium raimondii
Gorai.009G244400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 19620827-19622826 Gossypium raimondii
Gorai.009G244400 5.0kb upstream 5.0kb upstream 9498 true Chr09: 19622827-19632324 Gossypium raimondii
Gorai.009G244400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 19627325-19632324 Gossypium raimondii
Gorai.009G244400 5.0kb downstream 5.0kb downstream 9498 true Chr09: 19617827-19627324 Gossypium raimondii
Gorai.009G244400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 19617827-19622826 Gossypium raimondii
Gorai.009G244400 10.0kb upstream 10.0kb upstream 14498 true Chr09: 19622827-19637324 Gossypium raimondii
Gorai.009G244400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 19627325-19637324 Gossypium raimondii
Gorai.009G244400 10.0kb downstream 10.0kb downstream 14498 true Chr09: 19612827-19627324 Gossypium raimondii
Gorai.009G244400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 19612827-19622826 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836180 5264 Brassicales-Malvales View MSA
124337596 5266 SBM View MSA
124237844 5268 Malvidae View MSA
124062922 5270 Rosid View MSA
123736377 5271 Pentapetalae View MSA
122789736 5272 Eudicot View MSA
122045268 5273 Angiosperm View MSA
121348045 5274 Embryophyte View MSA
123425543 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain