Gene : Gorai.010G080400 G. raimondii v2.1
Defline:  (1 of 2) PTHR22594:SF34 - ASPARAGINE--TRNA LIGASE, MITOCHONDRIAL-RELATED Genomic Order:  804
Name:  ? Gorai.010G080400 Secondary Identifier:  ? PAC:26759988
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii TRNA-CHARGING-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.010G080400 0.5kb upstream 0.5kb upstream 3326 true Chr10: 11729317-11732642 Gossypium raimondii
Gorai.010G080400 0.5kb upstream 0.5kb upstream 500 false Chr10: 11729317-11729816 Gossypium raimondii
Gorai.010G080400 0.5kb downstream 0.5kb downstream 3326 true Chr10: 11729817-11733142 Gossypium raimondii
Gorai.010G080400 0.5kb downstream 0.5kb downstream 500 false Chr10: 11732643-11733142 Gossypium raimondii
Gorai.010G080400 1.0kb upstream 1.0kb upstream 3826 true Chr10: 11728817-11732642 Gossypium raimondii
Gorai.010G080400 1.0kb upstream 1.0kb upstream 1000 false Chr10: 11728817-11729816 Gossypium raimondii
Gorai.010G080400 1.0kb downstream 1.0kb downstream 3826 true Chr10: 11729817-11733642 Gossypium raimondii
Gorai.010G080400 1.0kb downstream 1.0kb downstream 1000 false Chr10: 11732643-11733642 Gossypium raimondii
Gorai.010G080400 2.0kb upstream 2.0kb upstream 4826 true Chr10: 11727817-11732642 Gossypium raimondii
Gorai.010G080400 2.0kb upstream 2.0kb upstream 2000 false Chr10: 11727817-11729816 Gossypium raimondii
Gorai.010G080400 2.0kb downstream 2.0kb downstream 4826 true Chr10: 11729817-11734642 Gossypium raimondii
Gorai.010G080400 2.0kb downstream 2.0kb downstream 2000 false Chr10: 11732643-11734642 Gossypium raimondii
Gorai.010G080400 5.0kb upstream 5.0kb upstream 7826 true Chr10: 11724817-11732642 Gossypium raimondii
Gorai.010G080400 5.0kb upstream 5.0kb upstream 5000 false Chr10: 11724817-11729816 Gossypium raimondii
Gorai.010G080400 5.0kb downstream 5.0kb downstream 7826 true Chr10: 11729817-11737642 Gossypium raimondii
Gorai.010G080400 5.0kb downstream 5.0kb downstream 5000 false Chr10: 11732643-11737642 Gossypium raimondii
Gorai.010G080400 10.0kb upstream 10.0kb upstream 12826 true Chr10: 11719817-11732642 Gossypium raimondii
Gorai.010G080400 10.0kb upstream 10.0kb upstream 10000 false Chr10: 11719817-11729816 Gossypium raimondii
Gorai.010G080400 10.0kb downstream 10.0kb downstream 12826 true Chr10: 11729817-11742642 Gossypium raimondii
Gorai.010G080400 10.0kb downstream 10.0kb downstream 10000 false Chr10: 11732643-11742642 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829828 5264 Brassicales-Malvales View MSA
124344559 5266 SBM View MSA
124246286 5268 Malvidae View MSA
124074798 5270 Rosid View MSA
123738885 5271 Pentapetalae View MSA
122790023 5272 Eudicot View MSA
122045893 5273 Angiosperm View MSA
121347200 5274 Embryophyte View MSA
123425101 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain