Gene : Gorai.010G223300 G. raimondii v2.1
Defline:  (1 of 1) PF00432//PF13249 - Prenyltransferase and squalene oxidase repeat (Prenyltrans) // Squalene-hopene cyclase N-terminal domain (SQHop_cyclase_N) Genomic Order:  2233
Name:  ? Gorai.010G223300 Secondary Identifier:  ? PAC:26759640
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-112 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.010G223300 0.5kb upstream 0.5kb upstream 8103 true Chr10: 59484759-59492861 Gossypium raimondii
Gorai.010G223300 0.5kb upstream 0.5kb upstream 500 false Chr10: 59492362-59492861 Gossypium raimondii
Gorai.010G223300 0.5kb downstream 0.5kb downstream 8103 true Chr10: 59484259-59492361 Gossypium raimondii
Gorai.010G223300 0.5kb downstream 0.5kb downstream 500 false Chr10: 59484259-59484758 Gossypium raimondii
Gorai.010G223300 1.0kb upstream 1.0kb upstream 8603 true Chr10: 59484759-59493361 Gossypium raimondii
Gorai.010G223300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 59492362-59493361 Gossypium raimondii
Gorai.010G223300 1.0kb downstream 1.0kb downstream 8603 true Chr10: 59483759-59492361 Gossypium raimondii
Gorai.010G223300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 59483759-59484758 Gossypium raimondii
Gorai.010G223300 2.0kb upstream 2.0kb upstream 9603 true Chr10: 59484759-59494361 Gossypium raimondii
Gorai.010G223300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 59492362-59494361 Gossypium raimondii
Gorai.010G223300 2.0kb downstream 2.0kb downstream 9603 true Chr10: 59482759-59492361 Gossypium raimondii
Gorai.010G223300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 59482759-59484758 Gossypium raimondii
Gorai.010G223300 5.0kb upstream 5.0kb upstream 12603 true Chr10: 59484759-59497361 Gossypium raimondii
Gorai.010G223300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 59492362-59497361 Gossypium raimondii
Gorai.010G223300 5.0kb downstream 5.0kb downstream 12603 true Chr10: 59479759-59492361 Gossypium raimondii
Gorai.010G223300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 59479759-59484758 Gossypium raimondii
Gorai.010G223300 10.0kb upstream 10.0kb upstream 17603 true Chr10: 59484759-59502361 Gossypium raimondii
Gorai.010G223300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 59492362-59502361 Gossypium raimondii
Gorai.010G223300 10.0kb downstream 10.0kb downstream 17603 true Chr10: 59474759-59492361 Gossypium raimondii
Gorai.010G223300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 59474759-59484758 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028235 5273 Angiosperm View MSA
123841722 5264 Brassicales-Malvales View MSA
124351667 5266 SBM View MSA
124245550 5268 Malvidae View MSA
124052067 5270 Rosid View MSA
123750414 5271 Pentapetalae View MSA
122773643 5272 Eudicot View MSA
121297756 5274 Embryophyte View MSA
123335781 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain