Gene : Gorai.010G048700 G. raimondii v2.1
Defline:  (1 of 1) KOG0231 - Junctional membrane complex protein Junctophilin and related MORN repeat proteins Genomic Order:  487
Name:  ? Gorai.010G048700 Secondary Identifier:  ? PAC:26756747
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-6351 Gossypium raimondii pathologic  
Graimondii PWY-6352 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.010G048700 0.5kb upstream 0.5kb upstream 3278 true Chr10: 5354182-5357459 Gossypium raimondii
Gorai.010G048700 0.5kb upstream 0.5kb upstream 500 false Chr10: 5356960-5357459 Gossypium raimondii
Gorai.010G048700 0.5kb downstream 0.5kb downstream 3278 true Chr10: 5353682-5356959 Gossypium raimondii
Gorai.010G048700 0.5kb downstream 0.5kb downstream 500 false Chr10: 5353682-5354181 Gossypium raimondii
Gorai.010G048700 1.0kb upstream 1.0kb upstream 3778 true Chr10: 5354182-5357959 Gossypium raimondii
Gorai.010G048700 1.0kb upstream 1.0kb upstream 1000 false Chr10: 5356960-5357959 Gossypium raimondii
Gorai.010G048700 1.0kb downstream 1.0kb downstream 3778 true Chr10: 5353182-5356959 Gossypium raimondii
Gorai.010G048700 1.0kb downstream 1.0kb downstream 1000 false Chr10: 5353182-5354181 Gossypium raimondii
Gorai.010G048700 2.0kb upstream 2.0kb upstream 4778 true Chr10: 5354182-5358959 Gossypium raimondii
Gorai.010G048700 2.0kb upstream 2.0kb upstream 2000 false Chr10: 5356960-5358959 Gossypium raimondii
Gorai.010G048700 2.0kb downstream 2.0kb downstream 4778 true Chr10: 5352182-5356959 Gossypium raimondii
Gorai.010G048700 2.0kb downstream 2.0kb downstream 2000 false Chr10: 5352182-5354181 Gossypium raimondii
Gorai.010G048700 5.0kb upstream 5.0kb upstream 7778 true Chr10: 5354182-5361959 Gossypium raimondii
Gorai.010G048700 5.0kb upstream 5.0kb upstream 5000 false Chr10: 5356960-5361959 Gossypium raimondii
Gorai.010G048700 5.0kb downstream 5.0kb downstream 7778 true Chr10: 5349182-5356959 Gossypium raimondii
Gorai.010G048700 5.0kb downstream 5.0kb downstream 5000 false Chr10: 5349182-5354181 Gossypium raimondii
Gorai.010G048700 10.0kb upstream 10.0kb upstream 12778 true Chr10: 5354182-5366959 Gossypium raimondii
Gorai.010G048700 10.0kb upstream 10.0kb upstream 10000 false Chr10: 5356960-5366959 Gossypium raimondii
Gorai.010G048700 10.0kb downstream 10.0kb downstream 12778 true Chr10: 5344182-5356959 Gossypium raimondii
Gorai.010G048700 10.0kb downstream 10.0kb downstream 10000 false Chr10: 5344182-5354181 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839023 5264 Brassicales-Malvales View MSA
124337793 5266 SBM View MSA
124241055 5268 Malvidae View MSA
124062192 5270 Rosid View MSA
123740472 5271 Pentapetalae View MSA
122790939 5272 Eudicot View MSA
122046556 5273 Angiosperm View MSA
121350119 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain