Gene : Gorai.005G242100 G. raimondii v2.1
Defline:  (1 of 16) 2.1.2.1 - Glycine hydroxymethyltransferase / Threonine aldolase Genomic Order:  2421
Name:  ? Gorai.005G242100 Secondary Identifier:  ? PAC:26805911
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii GLYSYN-PWY Gossypium raimondii pathologic  
Graimondii PWY-3841 Gossypium raimondii pathologic  
Graimondii SER-GLYSYN-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G242100 0.5kb upstream 0.5kb upstream 6428 true Chr05: 62294987-62301414 Gossypium raimondii
Gorai.005G242100 0.5kb upstream 0.5kb upstream 500 false Chr05: 62294987-62295486 Gossypium raimondii
Gorai.005G242100 0.5kb downstream 0.5kb downstream 6428 true Chr05: 62295487-62301914 Gossypium raimondii
Gorai.005G242100 0.5kb downstream 0.5kb downstream 500 false Chr05: 62301415-62301914 Gossypium raimondii
Gorai.005G242100 1.0kb upstream 1.0kb upstream 6928 true Chr05: 62294487-62301414 Gossypium raimondii
Gorai.005G242100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 62294487-62295486 Gossypium raimondii
Gorai.005G242100 1.0kb downstream 1.0kb downstream 6928 true Chr05: 62295487-62302414 Gossypium raimondii
Gorai.005G242100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 62301415-62302414 Gossypium raimondii
Gorai.005G242100 2.0kb upstream 2.0kb upstream 7928 true Chr05: 62293487-62301414 Gossypium raimondii
Gorai.005G242100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 62293487-62295486 Gossypium raimondii
Gorai.005G242100 2.0kb downstream 2.0kb downstream 7928 true Chr05: 62295487-62303414 Gossypium raimondii
Gorai.005G242100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 62301415-62303414 Gossypium raimondii
Gorai.005G242100 5.0kb upstream 5.0kb upstream 10928 true Chr05: 62290487-62301414 Gossypium raimondii
Gorai.005G242100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 62290487-62295486 Gossypium raimondii
Gorai.005G242100 5.0kb downstream 5.0kb downstream 10928 true Chr05: 62295487-62306414 Gossypium raimondii
Gorai.005G242100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 62301415-62306414 Gossypium raimondii
Gorai.005G242100 10.0kb upstream 10.0kb upstream 15928 true Chr05: 62285487-62301414 Gossypium raimondii
Gorai.005G242100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 62285487-62295486 Gossypium raimondii
Gorai.005G242100 10.0kb downstream 10.0kb downstream 15928 true Chr05: 62295487-62311414 Gossypium raimondii
Gorai.005G242100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 62301415-62311414 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825273 5264 Brassicales-Malvales View MSA
124320533 5266 SBM View MSA
124253011 5268 Malvidae View MSA
124069560 5270 Rosid View MSA
123741866 5271 Pentapetalae View MSA
122787051 5272 Eudicot View MSA
122046261 5273 Angiosperm View MSA
121345900 5274 Embryophyte View MSA
123426459 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain