Gene : Gorai.010G129400 G. raimondii v2.1
Defline:  (1 of 2) PTHR12161:SF21 - REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN Genomic Order:  1294
Name:  ? Gorai.010G129400 Secondary Identifier:  ? PAC:26758587
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.010G129400 0.5kb upstream 0.5kb upstream 5195 true Chr10: 28147942-28153136 Gossypium raimondii
Gorai.010G129400 0.5kb upstream 0.5kb upstream 500 false Chr10: 28152637-28153136 Gossypium raimondii
Gorai.010G129400 0.5kb downstream 0.5kb downstream 5195 true Chr10: 28147442-28152636 Gossypium raimondii
Gorai.010G129400 0.5kb downstream 0.5kb downstream 500 false Chr10: 28147442-28147941 Gossypium raimondii
Gorai.010G129400 1.0kb upstream 1.0kb upstream 5695 true Chr10: 28147942-28153636 Gossypium raimondii
Gorai.010G129400 1.0kb upstream 1.0kb upstream 1000 false Chr10: 28152637-28153636 Gossypium raimondii
Gorai.010G129400 1.0kb downstream 1.0kb downstream 5695 true Chr10: 28146942-28152636 Gossypium raimondii
Gorai.010G129400 1.0kb downstream 1.0kb downstream 1000 false Chr10: 28146942-28147941 Gossypium raimondii
Gorai.010G129400 2.0kb upstream 2.0kb upstream 6695 true Chr10: 28147942-28154636 Gossypium raimondii
Gorai.010G129400 2.0kb upstream 2.0kb upstream 2000 false Chr10: 28152637-28154636 Gossypium raimondii
Gorai.010G129400 2.0kb downstream 2.0kb downstream 6695 true Chr10: 28145942-28152636 Gossypium raimondii
Gorai.010G129400 2.0kb downstream 2.0kb downstream 2000 false Chr10: 28145942-28147941 Gossypium raimondii
Gorai.010G129400 5.0kb upstream 5.0kb upstream 9695 true Chr10: 28147942-28157636 Gossypium raimondii
Gorai.010G129400 5.0kb upstream 5.0kb upstream 5000 false Chr10: 28152637-28157636 Gossypium raimondii
Gorai.010G129400 5.0kb downstream 5.0kb downstream 9695 true Chr10: 28142942-28152636 Gossypium raimondii
Gorai.010G129400 5.0kb downstream 5.0kb downstream 5000 false Chr10: 28142942-28147941 Gossypium raimondii
Gorai.010G129400 10.0kb upstream 10.0kb upstream 14695 true Chr10: 28147942-28162636 Gossypium raimondii
Gorai.010G129400 10.0kb upstream 10.0kb upstream 10000 false Chr10: 28152637-28162636 Gossypium raimondii
Gorai.010G129400 10.0kb downstream 10.0kb downstream 14695 true Chr10: 28137942-28152636 Gossypium raimondii
Gorai.010G129400 10.0kb downstream 10.0kb downstream 10000 false Chr10: 28137942-28147941 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840797 5264 Brassicales-Malvales View MSA
124337965 5266 SBM View MSA
124245103 5268 Malvidae View MSA
124068076 5270 Rosid View MSA
123736868 5271 Pentapetalae View MSA
122789571 5272 Eudicot View MSA
122045314 5273 Angiosperm View MSA
121350449 5274 Embryophyte View MSA
123424640 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain