Gene : Gorai.010G186800 G. raimondii v2.1
Defline:  (1 of 2) PTHR11254//PTHR11254:SF329 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE Genomic Order:  1868
Name:  ? Gorai.010G186800 Secondary Identifier:  ? PAC:26756543
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-7511 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.010G186800 0.5kb upstream 0.5kb upstream 5742 true Chr10: 53770945-53776686 Gossypium raimondii
Gorai.010G186800 0.5kb upstream 0.5kb upstream 500 false Chr10: 53776187-53776686 Gossypium raimondii
Gorai.010G186800 0.5kb downstream 0.5kb downstream 5742 true Chr10: 53770445-53776186 Gossypium raimondii
Gorai.010G186800 0.5kb downstream 0.5kb downstream 500 false Chr10: 53770445-53770944 Gossypium raimondii
Gorai.010G186800 1.0kb upstream 1.0kb upstream 6242 true Chr10: 53770945-53777186 Gossypium raimondii
Gorai.010G186800 1.0kb upstream 1.0kb upstream 1000 false Chr10: 53776187-53777186 Gossypium raimondii
Gorai.010G186800 1.0kb downstream 1.0kb downstream 6242 true Chr10: 53769945-53776186 Gossypium raimondii
Gorai.010G186800 1.0kb downstream 1.0kb downstream 1000 false Chr10: 53769945-53770944 Gossypium raimondii
Gorai.010G186800 2.0kb upstream 2.0kb upstream 7242 true Chr10: 53770945-53778186 Gossypium raimondii
Gorai.010G186800 2.0kb upstream 2.0kb upstream 2000 false Chr10: 53776187-53778186 Gossypium raimondii
Gorai.010G186800 2.0kb downstream 2.0kb downstream 7242 true Chr10: 53768945-53776186 Gossypium raimondii
Gorai.010G186800 2.0kb downstream 2.0kb downstream 2000 false Chr10: 53768945-53770944 Gossypium raimondii
Gorai.010G186800 5.0kb upstream 5.0kb upstream 10242 true Chr10: 53770945-53781186 Gossypium raimondii
Gorai.010G186800 5.0kb upstream 5.0kb upstream 5000 false Chr10: 53776187-53781186 Gossypium raimondii
Gorai.010G186800 5.0kb downstream 5.0kb downstream 10242 true Chr10: 53765945-53776186 Gossypium raimondii
Gorai.010G186800 5.0kb downstream 5.0kb downstream 5000 false Chr10: 53765945-53770944 Gossypium raimondii
Gorai.010G186800 10.0kb upstream 10.0kb upstream 15242 true Chr10: 53770945-53786186 Gossypium raimondii
Gorai.010G186800 10.0kb upstream 10.0kb upstream 10000 false Chr10: 53776187-53786186 Gossypium raimondii
Gorai.010G186800 10.0kb downstream 10.0kb downstream 15242 true Chr10: 53760945-53776186 Gossypium raimondii
Gorai.010G186800 10.0kb downstream 10.0kb downstream 10000 false Chr10: 53760945-53770944 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835538 5264 Brassicales-Malvales View MSA
124343855 5266 SBM View MSA
124239492 5268 Malvidae View MSA
124063401 5270 Rosid View MSA
123749847 5271 Pentapetalae View MSA
122786985 5272 Eudicot View MSA
122048097 5273 Angiosperm View MSA
123429069 5275 Viridiplantae View MSA
121348188 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain