Gene : Gorai.010G118700 G. raimondii v2.1
Defline:  (1 of 2) PTHR21145:SF1 - CHORISMATE MUTASE 2 Genomic Order:  1187
Name:  ? Gorai.010G118700 Secondary Identifier:  ? PAC:26758677
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-3461 Gossypium raimondii pathologic  
Graimondii PWY-3462 Gossypium raimondii pathologic  
Graimondii PWY-3481 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.010G118700 0.5kb upstream 0.5kb upstream 3563 true Chr10: 23676848-23680410 Gossypium raimondii
Gorai.010G118700 0.5kb upstream 0.5kb upstream 500 false Chr10: 23676848-23677347 Gossypium raimondii
Gorai.010G118700 0.5kb downstream 0.5kb downstream 3563 true Chr10: 23677348-23680910 Gossypium raimondii
Gorai.010G118700 0.5kb downstream 0.5kb downstream 500 false Chr10: 23680411-23680910 Gossypium raimondii
Gorai.010G118700 1.0kb upstream 1.0kb upstream 4063 true Chr10: 23676348-23680410 Gossypium raimondii
Gorai.010G118700 1.0kb upstream 1.0kb upstream 1000 false Chr10: 23676348-23677347 Gossypium raimondii
Gorai.010G118700 1.0kb downstream 1.0kb downstream 4063 true Chr10: 23677348-23681410 Gossypium raimondii
Gorai.010G118700 1.0kb downstream 1.0kb downstream 1000 false Chr10: 23680411-23681410 Gossypium raimondii
Gorai.010G118700 2.0kb upstream 2.0kb upstream 5063 true Chr10: 23675348-23680410 Gossypium raimondii
Gorai.010G118700 2.0kb upstream 2.0kb upstream 2000 false Chr10: 23675348-23677347 Gossypium raimondii
Gorai.010G118700 2.0kb downstream 2.0kb downstream 5063 true Chr10: 23677348-23682410 Gossypium raimondii
Gorai.010G118700 2.0kb downstream 2.0kb downstream 2000 false Chr10: 23680411-23682410 Gossypium raimondii
Gorai.010G118700 5.0kb upstream 5.0kb upstream 8063 true Chr10: 23672348-23680410 Gossypium raimondii
Gorai.010G118700 5.0kb upstream 5.0kb upstream 5000 false Chr10: 23672348-23677347 Gossypium raimondii
Gorai.010G118700 5.0kb downstream 5.0kb downstream 8063 true Chr10: 23677348-23685410 Gossypium raimondii
Gorai.010G118700 5.0kb downstream 5.0kb downstream 5000 false Chr10: 23680411-23685410 Gossypium raimondii
Gorai.010G118700 10.0kb upstream 10.0kb upstream 13063 true Chr10: 23667348-23680410 Gossypium raimondii
Gorai.010G118700 10.0kb upstream 10.0kb upstream 10000 false Chr10: 23667348-23677347 Gossypium raimondii
Gorai.010G118700 10.0kb downstream 10.0kb downstream 13063 true Chr10: 23677348-23690410 Gossypium raimondii
Gorai.010G118700 10.0kb downstream 10.0kb downstream 10000 false Chr10: 23680411-23690410 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835007 5264 Brassicales-Malvales View MSA
124338638 5266 SBM View MSA
124239132 5268 Malvidae View MSA
124062994 5270 Rosid View MSA
123742772 5271 Pentapetalae View MSA
122797161 5272 Eudicot View MSA
122050627 5273 Angiosperm View MSA
121312036 5274 Embryophyte View MSA
123427559 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain